prot_H-canaliculatus_F_contig1541.4003.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1541.4003.1
Unique Nameprot_H-canaliculatus_F_contig1541.4003.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length196
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1541.4003.1 vs. uniprot
Match: D7G3X9_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X9_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 4.730e-47
Identity = 104/202 (51.49%), Postives = 119/202 (58.91%), Query Frame = 0 
Query:    1 MSAVGVLTLVWCDEDDQRDAFGSLTASRIAWGVFIAVAGWIAVSFVALAGFHTYLLLIGLGTYDWVVLQNQRRQERLASRRSAGSSG-----EGRCCGGQRSGRRPPISQDAEXXXXXXXXXXXXXXXXXXXXXXGRPLPDGGGAGANGRWSGVDEGIGVTPT-SRVLPEKGAAGVSTA----AVGGNGSKEAATPGMVRIP 192
            M+    LT++W DEDDQR+AFGSLTASRI WG+FIAVAGWIAVSFVALAGFHTYLLL+GLGTYDWVV+QNQRRQE+L +RRSAG +G      G C  G   GRRPP    A                       GRP        +NG W G   G GVTP  SR+L   G+ G   +    A GG G+  A  PG V  P
Sbjct:  125 MTVAATLTVIWADEDDQREAFGSLTASRITWGIFIAVAGWIAVSFVALAGFHTYLLLVGLGTYDWVVMQNQRRQEKLTARRSAGGAGGADSRPGFCGIGCGCGRRPPAVPTASTVQDVAGFSTP-----------GRPR-------SNGSWGGAGMGAGVTPPRSRILSGTGSVGRPKSGRMGARGGGGAVAAVPPGDVEGP 308
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1541.4003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3X9_ECTSI4.730e-4751.49Palmitoyltransferase n=1 Tax=Ectocarpus siliculosu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1541contigH-canaliculatus_F_contig1541:169..2189 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1541.4003.1mRNA_H-canaliculatus_F_contig1541.4003.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1541 89..3970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1541.4003.1 ID=prot_H-canaliculatus_F_contig1541.4003.1|Name=mRNA_H-canaliculatus_F_contig1541.4003.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=196bp
MSAVGVLTLVWCDEDDQRDAFGSLTASRIAWGVFIAVAGWIAVSFVALAG
FHTYLLLIGLGTYDWVVLQNQRRQERLASRRSAGSSGEGRCCGGQRSGRR
PPISQDAEGGASAPTAAAAAAAAAAAAAAAGRPLPDGGGAGANGRWSGVD
EGIGVTPTSRVLPEKGAAGVSTAAVGGNGSKEAATPGMVRIPLDP*
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