prot_H-canaliculatus_F_contig154.3991.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig154.3991.1
Unique Nameprot_H-canaliculatus_F_contig154.3991.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length400
Homology
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: D7FV84_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV84_ECTSI)

HSP 1 Score: 544 bits (1402), Expect = 1.100e-191
Identity = 288/399 (72.18%), Postives = 314/399 (78.70%), Query Frame = 0
Query:    1 MRYFLLHKPRGCITSTVDDTERGRPTVYDVAKAAEGVPCFGPVGRLDFDTSGALLFTDDFKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTVKPEDKGMHLLEEPLHFGRKKDGPGGCWTKPAEARVLLTKTFTTGQPVPWRFKPGTTATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEALYMRCLPQDPLCPTIGAVRDTLTTRLAQAAQRASPMTNLAGCHSTTSATSTVPTRKQESESESEAVERCITEEAEQGGTVRGAVDGKARHAEGALISSSSNKSERRPADALAGAEDLARIARLMVDCARRYLHETPPGPDGESAEPGFCAGEKESLAQARAVPPDENHMVCGYRSSQIERLGLAYGVM 399
            MRYF+LHKPRGC+TSTVDDT RGRPTVYDVAKAA GVP FGPVGRLDFDTSG LLFTDD+KLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGT+ PEDKGM LL+EPLHF RK DGPGG WTKPAEARVLLTKTF TGQPVPWRFKPGT ATITWIEVVLREGKNRQIRRLCRRSEFELTRLHR+SVGPIVLGD+EEG CREL+R+EVEALY RCLP+DPLCPTI AV+D L +RL+Q A+R      + G        S+     Q+     +  ER   E+AEQ    R A   KAR  E      ++    RR   A A  EDLA I + ++D ARR LHETP GPDGESA P +C GEKESLAQARAVPP+E HMVCGYRSSQIERLGL YG M
Sbjct:    1 MRYFMLHKPRGCVTSTVDDTGRGRPTVYDVAKAA-GVPNFGPVGRLDFDTSGVLLFTDDYKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTITPEDKGMDLLQEPLHFSRKLDGPGGSWTKPAEARVLLTKTFKTGQPVPWRFKPGTVATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRISVGPIVLGDVEEGSCRELTRQEVEALYKRCLPEDPLCPTIDAVQDILQSRLSQTARRIRTTAEVGGHRFKAREHSSAMDVPQK-----DMPERPTAEDAEQ----RRAA--KARDGERGCPCRTTQGPGRRRVKAFATEEDLASIMKRLIDFARRDLHETPAGPDGESAGPDYCPGEKESLAQARAVPPNETHMVCGYRSSQIERLGLTYGTM 387          
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: A0A6H5L3F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3F2_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 3.310e-107
Identity = 182/280 (65.00%), Postives = 200/280 (71.43%), Query Frame = 0
Query:  120 GCWTKPAEARVLLTKTFTTGQPVPWRFKPGTTATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEALYMRCLPQDPLCPTIGAVRDTLTTRLAQAAQRASPMTNLAGCHSTTSATSTVPTRKQESESESEAVERCITEEAEQGGTVRGAVDGKARHAEGALISSSSNKSERRPADALAGAEDLARIARLMVDCARRYLHETPPGPDGESAEPGFCAGEKESLAQARAVPPDENHMVCGYRSSQIERLGLAYGVM 399
            G WTKPAEARVLLTKTF TGQPVPWRFKPGT ATITWIEVVLREGKNRQIRRLCRRSEFELTRLHR+SVGPIVLGD+ EG CREL+RREVEALY RCLP+DPLCPTI AV+D L +RLAQ A+R      + G        S+     Q+     +A ER   E+AEQ    R A   K R  E               A A AG EDLA I + ++D +RR LHETP GPDGESA P +C GEKESLAQARAVPP+E HMVCGYRSSQIERLGL YG M
Sbjct:   15 GSWTKPAEARVLLTKTFKTGQPVPWRFKPGTVATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRISVGPIVLGDVAEGSCRELTRREVEALYKRCLPEDPLCPTIDAVQDILKSRLAQTARRIRTAAEVGGHRFEAREHSSAMDVPQK-----DAPERPTREDAEQ----RWAA--KVRDGECGCPXXXXXXXXXXRAKAFAGEEDLASIVKRLIDFSRRDLHETPAGPDGESAGPDYCPGEKESLAQARAVPPNETHMVCGYRSSQIERLGLTYGTM 283          
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: A0A6H5L0P5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0P5_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.620e-56
Identity = 92/103 (89.32%), Postives = 98/103 (95.15%), Query Frame = 0
Query:    1 MRYFLLHKPRGCITSTVDDTERGRPTVYDVAKAAEGVPCFGPVGRLDFDTSGALLFTDDFKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTVKPEDKGMH 103
            MRYF+LHKPRGC+TSTVDDT RGRPTVYDVAKAA GVP FGPVGRLDFDTSG LLFTDD+KLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGT+ PEDKG++
Sbjct:    1 MRYFMLHKPRGCVTSTVDDTGRGRPTVYDVAKAA-GVPNFGPVGRLDFDTSGVLLFTDDYKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTITPEDKGVN 102          
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: A0A838IEP5_9DELT (Pseudouridine synthase n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IEP5_9DELT)

HSP 1 Score: 144 bits (362), Expect = 2.130e-37
Identity = 88/218 (40.37%), Postives = 121/218 (55.50%), Query Frame = 0
Query:    5 LLHKPRGCITSTVDDTERGRPTVYDVAKAAEGVPCFGPVGRLDFDTSGALLFTDDFKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTVKPEDKGMHLLEEPLHFGRKKDGPGGCWTKPAEARVLLTKTFTTGQPVPWRFKPGTTATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEALYMRCLPQDPL 222
            +++KP GCIT+  DD   GR TVY  A      P  G VGRLD++T G LLFTDD +L +A+ +  + G         +EKVYH+ + G V+  D  +  LEEPL     K GPG   T+PA ARV+  +  T                 +WIE+V+ EG++RQ+R+LC RS  ++ +L R+ +GP+ LG+L    CR L R EV ALY   L  D L
Sbjct:    1 MMNKPAGCITARTDD--EGRQTVY--AHVPAHFPALGHVGRLDYNTEGLLLFTDDGRLSQALLNKAFSGAP-------VEKVYHVKIKGIVEDGDARLARLEEPL-----KSGPGKT-TEPARARVVERRDKT-----------------SWIELVICEGRHRQVRKLCERSGLQIRKLRRMRLGPLELGELRLRWCRPLERAEVAALYAAALADDAL 184          
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: A0A328C9E6_9DELT (Pseudouridine synthase n=9 Tax=Bradymonadales TaxID=1779134 RepID=A0A328C9E6_9DELT)

HSP 1 Score: 134 bits (337), Expect = 8.780e-34
Identity = 87/226 (38.50%), Postives = 127/226 (56.19%), Query Frame = 0
Query:    1 MRYFLLHKPRGCITSTVDDTERGRPTVYD-VAKAAEGVPCFGPVGRLDFDTSGALLFTDDFKLKKAISSPTYKGKAAV----GTVPSMEKVYHLLVAGTVKPEDKGMHLLEEPLHFGRKKDGPGGCWTKPAEARVLLTKTFTTGQPVPWRFKPGTTATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEALYMRCLPQDP 221
            M  F+++KP GCIT+ VD  +R  PTVYD V K  E +P    VGRLDF+T G LLFTDD KL +A+ +  Y G  ++      +  +EKVYH+ V   + P+   +  L+EPL +        G +T PA          TTG    W  +    ++ TWI + + EG++RQ+R+LC RS  ++ +L RV +GP+ LG+L+   CREL+  E+  LY+     DP
Sbjct:    1 MPAFIMNKPPGCITARVDFEDR--PTVYDHVPKHFEPLP---HVGRLDFNTEGLLLFTDDGKLAQALLNKDYAGPTSMEETSAELAPIEKVYHVKVKAKLGPDHPVLAALQEPLEY------EPGKFTAPA----------TTG----WVAER---SSCTWISITITEGRHRQVRKLCERSGLQIRKLRRVRLGPLGLGELKLRWCRELTDEELTELYVAAFGHDP 198          
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: E6SKM7_THEM7 (Pseudouridine synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) TaxID=644966 RepID=E6SKM7_THEM7)

HSP 1 Score: 131 bits (330), Expect = 1.590e-31
Identity = 96/246 (39.02%), Postives = 134/246 (54.47%), Query Frame = 0
Query:    2 RYFLLHKPRGCITSTVDDTERGRPTVYDVAKAAEGVPCFGPVGRLDFDTSGALLFTDDFKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTVKPEDKGMHLLEEPLHFGRKKDGPGGCWTKPAEARVLLTKTFTTGQPVPWRFKPGTTATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEALYMRC-LP--QDPLCPTIGAVRDTLTTRLAQAAQRA 244
            RY +LHKPRG +T+  D   +GRP+V D  + A G+    PVGRLDFD+ G LL TDD +L  A++ P ++          ++KVYH+LV G ++P+   +  L + +      DGP     +   AR+L             R +PG      W+EVVLREG+ RQ+RR+CR   +++ RL RV+VGP+ LG L  G  R LSR+EVEAL     LP   D   P  G     +T+R   A+ RA
Sbjct:   68 RYVMLHKPRGMVTTLRDP--QGRPSVGDFCRRA-GLRGLHPVGRLDFDSEGLLLLTDDGELTFALTHPRHE----------VDKVYHVLVRGPLEPQR--LRRLRDGVLLD---DGPA----RARSARIL-------------RPRPGG----GWVEVVLREGRKRQVRRMCRAVGWDVVRLVRVAVGPLRLGRLTAGQWRPLSRQEVEALRAAAGLPIHGDEPAPREGGAAPAITSRWRAASPRA 274          
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: K6NYC6_9FIRM (Pseudouridine synthase n=2 Tax=Thermaerobacter TaxID=73918 RepID=K6NYC6_9FIRM)

HSP 1 Score: 122 bits (305), Expect = 6.540e-28
Identity = 84/221 (38.01%), Postives = 117/221 (52.94%), Query Frame = 0
Query:    2 RYFLLHKPRGCITSTVDDTERGRPTVYDVAKAAEGVPCFGPVGRLDFDTSGALLFTDDFKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTVKPEDKGMHLLEEPLHFGRKKDGPGGCWTKPAEARVLLTKTFTTGQPVPWRFKPGTTATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEALYMRC-LPQDP 221
            RY L HKPRG +T+  D   +GRP V D  +   G+    PVGRLDFD+ G LL TDD +L  A++ P ++          ++KVYH+LV G +           +P    R +DG          AR  + +          R +PG      W+EVVLREG+ RQ+RR+C+   +++ RL RV+VGP+ LG L  G  R LSR+EVE+L +   LP  P
Sbjct:   68 RYVLFHKPRGMVTTLRDP--QGRPNVGDFCRR-HGLQGLHPVGRLDFDSEGLLLLTDDGELTFALTHPRHE----------VDKVYHVLVRGDL-----------DPARLRRLRDG---VLLDDGPARARIARVL--------RPRPGG----GWVEVVLREGRKRQVRRMCQAVGWQVVRLVRVAVGPLRLGRLAAGAWRPLSRQEVESLRVAAGLPPRP 249          
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: A0A7S1FRY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRY8_9STRA)

HSP 1 Score: 116 bits (290), Expect = 9.080e-28
Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 0
Query:    3 YFLLHKPRGCITSTVDDTERGRPTVYDVAKAAEGVPCFGPVGRLDFDTSGALLFTDDFKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTVKPEDKGMHLLEEPLHF 111
            YF LHKPRGC++ST D+T  GR T+YD      G P  G VGRLDFDTSG +L T+D KL  A++SP +KG A   TV  +EKVY + VAG  +   + + LL+EPLH+
Sbjct:   25 YFALHKPRGCLSSTKDETGLGRLTIYDFVTRC-GFPKVGHVGRLDFDTSGVILLTNDVKLSIALTSPRFKGNADPDTVSPLEKVYLVTVAGYFEENSEAIRLLQEPLHY 132          
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: A0A4P7GUD9_9FIRM (Pseudouridine synthase n=2 Tax=Firmicutes TaxID=1239 RepID=A0A4P7GUD9_9FIRM)

HSP 1 Score: 117 bits (293), Expect = 1.050e-26
Identity = 82/211 (38.86%), Postives = 115/211 (54.50%), Query Frame = 0
Query:    2 RYFLLHKPRGCITSTVDDTERGRPTVYDVAKAAEGVPCFGPVGRLDFDTSGALLFTDDFKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTVKPEDKGMHLLEEPLHFGRKKDGPGGCWTKPAEARVLLTKTFTTGQPVPWRFKPGTTATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEAL 212
            RY L HKPRG +T+  D   +GRP+V D  +   G+    PVGRLD D+ G LL TDD +L  A++ P ++          ++KVYH+LV G +  E + +  L + +      DGP     +   AR+L             R +PG      W+EVVLREG+ RQ+RR+CR   +++ RL RV+VGP+ LG L  G  R L+R EV AL
Sbjct:   68 RYVLFHKPRGMVTTLRDP--QGRPSVGDFCRRV-GLAGLHPVGRLDVDSEGLLLLTDDGELTFALTHPRHE----------VDKVYHVLVRGPL--EARRLRRLRDGVLLD---DGPA----RARAARIL-------------RRRPGG----GWVEVVLREGRKRQVRRMCRAVGWDVVRLVRVAVGPLRLGRLAPGRWRPLTRAEVRAL 239          
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Match: UPI0019E4CA9C (rRNA pseudouridine synthase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019E4CA9C)

HSP 1 Score: 111 bits (277), Expect = 9.040e-25
Identity = 73/210 (34.76%), Postives = 109/210 (51.90%), Query Frame = 0
Query:    3 YFLLHKPRGCITSTVDDTERGRPTVYDVAKAAEGVPCFGPVGRLDFDTSGALLFTDDFKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTVKPEDKGMHLLEEPLHFGRKKDGPGGCWTKPAEARVLLTKTFTTGQPVPWRFKPGTTATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEAL 212
            Y+LL+KP+GC+T+  D   RGR TV D+ K  +      PVGRLD+DT+G L+ T+D +L  A++ P  +          ++K YH LV G   P ++ +  L E +     +DG     T PA+ RVL  K                    +W+E+++ EGKNRQ++R+C     ++ RL R   GP+ + DL  G  R L   E+EAL
Sbjct:   64 YYLLNKPKGCVTTMKDP--RGRLTVNDLLKDID--ERVYPVGRLDYDTTGVLIITNDGELANALAHPKKE----------IDKYYHALVQGV--PSNEALKRLREGVQL---EDGK----TAPAKIRVLEIK-----------------GNKSWLEIIIHEGKNRQVKRMCEAISHKVLRLKRTRFGPLEVNDLASGKIRALKDGEIEAL 233          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig154.3991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV84_ECTSI1.100e-19172.18Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5L3F2_9PHAE3.310e-10765.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0P5_9PHAE1.620e-5689.32PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A838IEP5_9DELT2.130e-3740.37Pseudouridine synthase n=1 Tax=Bradymonadaceae bac... [more]
A0A328C9E6_9DELT8.780e-3438.50Pseudouridine synthase n=9 Tax=Bradymonadales TaxI... [more]
E6SKM7_THEM71.590e-3139.02Pseudouridine synthase n=1 Tax=Thermaerobacter mar... [more]
K6NYC6_9FIRM6.540e-2838.01Pseudouridine synthase n=2 Tax=Thermaerobacter Tax... [more]
A0A7S1FRY8_9STRA9.080e-2852.29Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A4P7GUD9_9FIRM1.050e-2638.86Pseudouridine synthase n=2 Tax=Firmicutes TaxID=12... [more]
UPI0019E4CA9C9.040e-2534.76rRNA pseudouridine synthase n=1 Tax=Proteobacteria... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.580coord: 5..202
e-value: 6.3E-38
score: 132.2
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 2..212
NoneNo IPR availablePANTHERPTHR21600:SF2RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 2..212
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 68..194
e-value: 6.3E-38
score: 132.2
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 3..173
e-value: 5.4E-12
score: 46.1
IPR018496Pseudouridine synthase, RsuA/RluB/E/F, conserved sitePROSITEPS01149PSI_RSUcoord: 44..58
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 3..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig154contigH-canaliculatus_F_contig154:14981..20208 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig154.3991.1mRNA_H-canaliculatus_F_contig154.3991.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig154 13755..20208 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig154.3991.1 ID=prot_H-canaliculatus_F_contig154.3991.1|Name=mRNA_H-canaliculatus_F_contig154.3991.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=400bp
MRYFLLHKPRGCITSTVDDTERGRPTVYDVAKAAEGVPCFGPVGRLDFDT
SGALLFTDDFKLKKAISSPTYKGKAAVGTVPSMEKVYHLLVAGTVKPEDK
GMHLLEEPLHFGRKKDGPGGCWTKPAEARVLLTKTFTTGQPVPWRFKPGT
TATITWIEVVLREGKNRQIRRLCRRSEFELTRLHRVSVGPIVLGDLEEGC
CRELSRREVEALYMRCLPQDPLCPTIGAVRDTLTTRLAQAAQRASPMTNL
AGCHSTTSATSTVPTRKQESESESEAVERCITEEAEQGGTVRGAVDGKAR
HAEGALISSSSNKSERRPADALAGAEDLARIARLMVDCARRYLHETPPGP
DGESAEPGFCAGEKESLAQARAVPPDENHMVCGYRSSQIERLGLAYGVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR018496PsdUridine_synth_RsuA/RluB_CS
IPR006145PsdUridine_synth_RsuA/RluA
IPR042092PsdUridine_s_RsuA/RluB/E/F_cat