prot_H-canaliculatus_F_contig15384.3980.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15384.3980.1
Unique Nameprot_H-canaliculatus_F_contig15384.3980.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length452
Homology
BLAST of mRNA_H-canaliculatus_F_contig15384.3980.1 vs. uniprot
Match: D8LQA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA1_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 1.960e-29
Identity = 106/220 (48.18%), Postives = 125/220 (56.82%), Query Frame = 0
Query:   34 ADAWEVEVAVAKAMSXXXXXX-----GGGVFVLGAAPQEQTTDEDGV---LSDIAEGHEGQEDQDDEPRIGAFSEGTVGGVGKKHPARSSFTMGMGGSVGPRFPDWSSTGGANGTFPLRRAFT----QSGESPPSSA-AAVGRLKAVPLSESQATTESLRAWRKGLDARLAVSKDDGXXXXXXXXXXXXAMSLQQQTRNYAQLGRATALVMSRTKWASDV 240
            ADAWEVEVAVA    XXXXXX     GG V  L A               L D+ EG +  E Q +E RIG    G+ GG  ++  AR+SF++G  G  G   PDWS  GGANGTFPLRRA T      G  P S A +  GRL+ VPLSE+QA  ESLRAWR+  D R A   + G            A+SLQ Q+R++A+ GRATALV SRTKW SDV
Sbjct:   42 ADAWEVEVAVAXXXXXXXXXXXXXXXGGAVPELSAXXXXXXXXXXXXXXGLEDVPEGTD--EGQKEEARIGKEVVGSGGGKKRRPCARASFSVGGSGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHGPCSPADSGGGRLREVPLSEAQAMAESLRAWRQSFDVRNAFFGESGDGDAEEDRGR--AVSLQVQSRSFARRGRATALVTSRTKWTSDV 257          
BLAST of mRNA_H-canaliculatus_F_contig15384.3980.1 vs. uniprot
Match: A0A6H5L2B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B2_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.300e-25
Identity = 94/227 (41.41%), Postives = 124/227 (54.63%), Query Frame = 0
Query:   34 ADAWEVEVAVAKAMSXXXXXXGGGVFVLGAAPQEQTT------DEDGVLSDIAEGHEGQEDQDDEPRIGAFSEGTVGGVGKKHPARSSFTMGMGGSVGPRFPDWSSTGGANGTFPLRRAFT----QSGESPPSSAAAVG-RLKAVPLSESQATTESLRAWRKGLDARLAVSKDDGXXXXXXXXXXXXAMSLQQQTRNYAQLGRATALVMSRTKWASDVGVSGDTAAT 249
            ADA E+EVAVAKA +      GGG+   GA P+          + DG L D+ +G + +E +                    H AR+SF++G  G  G   PDWS  GGANGTFPLRRA T      G SP S A + G RLK VPLSE+QA  ESLRAWR+  D R A    +             A+SLQ+Q+R++A++GRATAL  S+TKW +DV   G+ +++
Sbjct:  348 ADALEMEVAVAKAKAAAVGAAGGGIAG-GAVPELSAXXXXXXXNGDG-LGDVPQGTD-EEQKXXXXXXXXXXXXXXXXXXXXHCARASFSVGESGLAGGGGPDWSPNGGANGTFPLRRALTFGEVGGGHSPSSPADSGGARLKEVPLSEAQAMAESLRAWRQSFDVRNASFGGESGDGDAEEDRDR-AVSLQEQSRSFARIGRATALFTSQTKWTTDVVGGGEGSSS 570          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15384.3980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQA1_ECTSI1.960e-2948.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2B2_9PHAE1.300e-2541.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableCOILSCoilCoilcoord: 291..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15384contigH-canaliculatus_F_contig15384:391..1762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15384.3980.1mRNA_H-canaliculatus_F_contig15384.3980.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15384 61..1792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15384.3980.1 ID=prot_H-canaliculatus_F_contig15384.3980.1|Name=mRNA_H-canaliculatus_F_contig15384.3980.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=452bp
MEALGLEQEQQELSVAQSNAAAHQEEEEKSERLADAWEVEVAVAKAMSAA
VAAAGGGVFVLGAAPQEQTTDEDGVLSDIAEGHEGQEDQDDEPRIGAFSE
GTVGGVGKKHPARSSFTMGMGGSVGPRFPDWSSTGGANGTFPLRRAFTQS
GESPPSSAAAVGRLKAVPLSESQATTESLRAWRKGLDARLAVSKDDGDGD
GDFEEDRGRAMSLQQQTRNYAQLGRATALVMSRTKWASDVGVSGDTAATA
AAEAPAAAAAVAEAEASGESLSGNGGAVDGRGESGGSGGAVNQEEQEEQR
QQQQQQQKRRRRRREGRSCCEPSATSSGVRREGLPLAWRPRRRAKPLCPQ
TRLWRRSSGRARRLPPGRRSSRRRRWQERRRWSGQRPQRLRARRRRKLAL
SPPPLLGRACPAARPLILPSSSWDSTTPRGRRRRRPRSACAWRRTACQTF
L*
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