prot_H-canaliculatus_F_contig1537.3975.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1537.3975.1
Unique Nameprot_H-canaliculatus_F_contig1537.3975.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length122
Homology
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: A0A6H5JHH0_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH0_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 4.570e-37
Identity = 72/110 (65.45%), Postives = 79/110 (71.82%), Query Frame = 0
Query:    1 MAKPAASKKSAKXXXXXXXXXXXXXXXXXXXKPKGAMSAFMQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKAAEPSS 110
            MAKPA SKKSAK                   KPKGA SAFMQFSQ+ER +VK ENPDMK+TE+SK+LGARWREMD+N KAPFQKKADKDKARY      Y AKKAAEP+S
Sbjct:    1 MAKPAVSKKSAKAASNGGPVKRKKKAKKDPNKPKGASSAFMQFSQKERAVVKEENPDMKVTEISKLLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS 110          
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: D7FLE3_ECTSI (ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE3_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 7.560e-28
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0
Query:   41 MQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKAAEPSS 110
            MQFSQ+ER +VK ENPDMK+TE+SKVLGARWREMD+N KAPFQKKADKDKARY      Y AKKAAEP+S
Sbjct:    1 MQFSQKERAVVKQENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS 70          
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 7.640e-19
Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 0
Query:   33 PKGAMSAFMQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKAA 106
            PKGAMSAFMQFSQ  R  VK +NP++K+TE+SKVLG +W ++DE  K P+Q KAD+DKARY      Y +KKAA
Sbjct:  553 PKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSKKAA 626          
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: D8Q5A9_SCHCM (HMG box domain-containing protein n=2 Tax=Schizophyllaceae TaxID=5332 RepID=D8Q5A9_SCHCM)

HSP 1 Score: 74.7 bits (182), Expect = 6.370e-15
Identity = 41/77 (53.25%), Postives = 50/77 (64.94%), Query Frame = 0
Query:   33 PKGAMSAFMQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKAAEPS 109
            PK A+SA+M FSQ  R  VKAENPD    E+ K+LGA+W+EMDE+ K P+  KA KDK R       Y  KK+AE S
Sbjct:   31 PKRALSAYMFFSQDWRERVKAENPDASFGELGKILGAKWKEMDEDEKKPYVAKAAKDKERAEADKAAYDEKKSAEAS 107          
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: A0A166GYV5_9AGAM (HMG box domain-containing protein n=1 Tax=Peniophora sp. CONT TaxID=1314672 RepID=A0A166GYV5_9AGAM)

HSP 1 Score: 74.3 bits (181), Expect = 1.960e-14
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   33 PKGAMSAFMQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKAAEPSSE 111
            PK  +SA+M FSQ  R  VK ++PD    E+ K+LG +W+EMDE+ K P+ K+A +DKARY      Y+A KAA  S E
Sbjct:   62 PKRGLSAYMFFSQDHREQVKKDHPDASFGELGKILGGKWKEMDEDDKKPYAKQAAEDKARYEREKEEYEAGKAASGSGE 140          
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: UPI000440762B (HMG-box n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI000440762B)

HSP 1 Score: 72.4 bits (176), Expect = 5.090e-14
Identity = 45/111 (40.54%), Postives = 59/111 (53.15%), Query Frame = 0
Query:    1 MAKPAASKKSAKXXXXXXXXXXXXXXXXXXXKPKGAMSAFMQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKAAEPSSE 111
            M K A +KK+ K                    PK A+SA+M FSQ  R  VKAENPD    E+ K+LGA+W+EMDE+ K P+ ++A +DKAR       Y+ K A E   E
Sbjct:    1 MPKEATAKKTRKAAAGAADKPARGKGKKDPNAPKRALSAYMFFSQDWRERVKAENPDAGFGEVGKLLGAKWKEMDESEKRPYIEQAARDKARAEEEKANYEKKSAGEDDEE 111          
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: A0A8K0UP64_9AGAM (High mobility group box domain-containing protein n=1 Tax=Cristinia sonorae TaxID=1940300 RepID=A0A8K0UP64_9AGAM)

HSP 1 Score: 71.2 bits (173), Expect = 1.510e-13
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0
Query:   33 PKGAMSAFMQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKAAEPSS 110
            PK A+SA+M FSQ  R  +KAENPD    E+ K+LGA+W+E+DE+ K P+ ++A +DKAR       Y  KKAA+  S
Sbjct:   31 PKRALSAYMFFSQDWRERIKAENPDAGFGEIGKLLGAKWKELDESEKKPYIEQAARDKARAEEEKSAYDGKKAADSGS 108          
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: A0A5E3X9L3_9AGAM (HMG box domain-containing protein n=1 Tax=Peniophora sp. CBMAI 1063 TaxID=718367 RepID=A0A5E3X9L3_9AGAM)

HSP 1 Score: 71.2 bits (173), Expect = 1.510e-13
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   33 PKGAMSAFMQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKAAEPSSE 111
            PK  +SA+M FSQ  R  VK ++PD    E+ K+LG +W+EMD++ K P+ K+A +DKARY      Y++ KAA  S E
Sbjct:   32 PKRGLSAYMFFSQDHREQVKKDHPDASFGELGKILGGKWKEMDDDDKKPYIKQAAEDKARYEREKEEYESGKAASGSGE 110          
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: A0A165NBF9_9APHY (HMG box domain-containing protein n=2 Tax=Fomitopsidaceae TaxID=1769247 RepID=A0A165NBF9_9APHY)

HSP 1 Score: 69.7 bits (169), Expect = 6.330e-13
Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 0
Query:   33 PKGAMSAFMQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKAAEPSS 110
            PK A+SA+M FSQ  R  VKAENPD    E+ K+LGA+W+E+D++ K P+ ++A +DKAR       Y  KK   P S
Sbjct:   32 PKRALSAYMFFSQDWRERVKAENPDASFGEIGKLLGAKWKELDDSEKKPYIEQAARDKARAEQEKADYDGKKVDSPGS 109          
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Match: A0A1Y2FPQ8_9BASI (High mobility group box domain-containing protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2FPQ8_9BASI)

HSP 1 Score: 69.7 bits (169), Expect = 6.970e-13
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   33 PKGAMSAFMQFSQQERPMVKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYXXXXXXYKAKKA 105
            PK  +SA+M FSQ+ R  VK ENP+    ++ K+LGA+W+EMD++ K PF K+A+ DKARY      Y +K A
Sbjct:   28 PKRPLSAYMFFSQENRATVKEENPEASFGDLGKLLGAKWKEMDDDEKKPFVKQANDDKARYETEKEAYDSKAA 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1537.3975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHH0_9PHAE4.570e-3765.45HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLE3_ECTSI7.560e-2877.14ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) t... [more]
D7FLF8_ECTSI7.640e-1960.81FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
D8Q5A9_SCHCM6.370e-1553.25HMG box domain-containing protein n=2 Tax=Schizoph... [more]
A0A166GYV5_9AGAM1.960e-1448.10HMG box domain-containing protein n=1 Tax=Peniopho... [more]
UPI000440762B5.090e-1440.54HMG-box n=1 Tax=Fomitiporia mediterranea (strain M... [more]
A0A8K0UP64_9AGAM1.510e-1348.72High mobility group box domain-containing protein ... [more]
A0A5E3X9L3_9AGAM1.510e-1345.57HMG box domain-containing protein n=1 Tax=Peniopho... [more]
A0A165NBF9_9APHY6.330e-1347.44HMG box domain-containing protein n=2 Tax=Fomitops... [more]
A0A1Y2FPQ8_9BASI6.970e-1347.95High mobility group box domain-containing protein ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 85..105
score: 42.68
coord: 66..85
score: 31.85
coord: 48..66
score: 37.04
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 8..118
NoneNo IPR availablePANTHERPTHR13711:SF302HIGH MOBILITY GROUP PROTEIN DSP1-RELATEDcoord: 8..118
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 32..102
e-value: 1.5E-26
score: 104.2
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 33..101
e-value: 1.1E-22
score: 80.2
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 33..101
score: 20.604
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 17..117
e-value: 1.9E-29
score: 103.8
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 23..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1537contigH-canaliculatus_F_contig1537:7851..20826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1537.3975.1mRNA_H-canaliculatus_F_contig1537.3975.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1537 7794..21749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1537.3975.1 ID=prot_H-canaliculatus_F_contig1537.3975.1|Name=mRNA_H-canaliculatus_F_contig1537.3975.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=122bp
MAKPAASKKSAKAAAKVAPVKRKKKAKKDPNKPKGAMSAFMQFSQQERPM
VKAENPDMKITEMSKVLGARWREMDENGKAPFQKKADKDKARYQKEMEKY
KAKKAAEPSSEEEEESEEESD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036910HMG_box_dom_sf
IPR009071HMG_box_dom