prot_H-canaliculatus_F_contig15367.3973.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15367.3973.1
Unique Nameprot_H-canaliculatus_F_contig15367.3973.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length152
Homology
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BLAST of mRNA_H-canaliculatus_F_contig15367.3973.1 vs. uniprot
Match: A0A6H5K0W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W7_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 8.450e-6
Identity = 43/90 (47.78%), Postives = 50/90 (55.56%), Query Frame = 0 
Query:    1 SSRAAADAERRSQSLQRRAEQEKDKAESAQSSTVRXXXXRAEGERALGLFQGSMERALRDVEDSLVDALQGVGT-ERFGAAAVDEGGWAG 89
            S+RAAA+AERRS +L+                  R    R E ERALG FQGSM RAL+DVED+L DALQG+G  E F     D  G  G
Sbjct:  333 SARAAAEAERRSDALKXXXXXXXXXXXXXXXLXXRAEAARDERERALGEFQGSMTRALQDVEDALADALQGIGGWEPFHQGGEDFAGGGG 422
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15367.3973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0W7_9PHAE8.450e-647.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15367contigH-canaliculatus_F_contig15367:774..2184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15367.3973.1mRNA_H-canaliculatus_F_contig15367.3973.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15367 774..2184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15367.3973.1 ID=prot_H-canaliculatus_F_contig15367.3973.1|Name=mRNA_H-canaliculatus_F_contig15367.3973.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=152bp
SSRAAADAERRSQSLQRRAEQEKDKAESAQSSTVRAEAARAEGERALGLF
QGSMERALRDVEDSLVDALQGVGTERFGAAAVDEGGWAGPPGTTEPPPPP
LPPVAAAAAAAAAAAAVPEAAVPEASRGRGAPRLCLSSDGRSRGGGSGGG
GD
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