prot_H-canaliculatus_F_contig1529.3924.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1529.3924.1
Unique Name	prot_H-canaliculatus_F_contig1529.3924.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	638

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1529.3924.1 vs. uniprot
Match: D7G1J8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J8_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 2.520e-157
Identity = 267/384 (69.53%), Postives = 300/384 (78.12%), Query Frame = 0

Query:   61 PGDKSRALLGFGLSKSTGGGTFSGSYQRVSSWNDDGGXXXX---------DEGVTARSLSINSDGGG------EIPRGLAAGGSDPPTAITHVMKSDRRSLGAAAEG--TTGVAAKRAFSWFLSFEDRQILKRRTILARISSLVLLTSFASDLDLITDWTFLHYGLAGQGIVIRKLALVFAIMGTIMWALSTTEFSLMSKLKTMWKGNPLSRLQHVGLGWQLLANVFLEDVPQFVITIITRPTSVSGVLNLTASGLSLCAKIVKGVSSQRAPSLATQFMMIDQDPAVTRNLFKLRDEAKKKAKSAEQLVYLAWENRRVAGEEKAAAVFRVLQMDPTFVNGDLDYMRPDLFAGSRLYITSCSLTGSIPSELGSLTVLKTLVLCRN 427
            PGDKSRAL G GLS S GGGTFSGSYQR+ SW  D  XXXX         D G   RSLSINSDGGG             A  +   T +   +K  RR+ G  + G   +G       SWFLS +DRQ+LKRRTIL+RI+ +VLL+SF  DLDLITDWTFL YGLAGQG +IRKLAL FAI+GT+MWALSTTEFSLMSKLK MWKGNPLSRLQHVGLGWQLLANVFLEDVPQF+IT+ITRPTSV+GVLNL ASGLSLCAKIV G SSQRAPSL+TQF MIDQDPAVTRNLFKLRDEAKKKAK+AE+LVYLAW NR   GE+KAAAVF+VLQMDPTFV GDL+YMR DLF+GSRLYIT+ SLTG IPS++G +T+L+ +VL  N
Sbjct:   26 PGDKSRALAGLGLSASKGGGTFSGSYQRLPSWGGDXXXXXXXXXXXXXXXDGGDVPRSLSINSDGGGFGAGTXXXXXXXXAAATARSTELGPAIK--RRAPGKTSRGLGASGGRGSGGHSWFLSAKDRQVLKRRTILSRITPIVLLSSFVGDLDLITDWTFLKYGLAGQGFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMWKGNPLSRLQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIVHGYSSQRAPSLSTQFKMIDQDPAVTRNLFKLRDEAKKKAKAAEKLVYLAWANRCSTGEQKAAAVFQVLQMDPTFVGGDLEYMRADLFSGSRLYITASSLTGPIPSQVGDMTILRAVVLSGN 407

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BLAST of mRNA_H-canaliculatus_F_contig1529.3924.1 vs. uniprot
Match: A0A6H5JNU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU7_9PHAE)

HSP 1 Score: 331 bits (849), Expect = 8.780e-105
Identity = 206/339 (60.77%), Postives = 230/339 (67.85%), Query Frame = 0

Query:   29 IAGYVSDGAASDASDPGVFGASSTTAASFATTPGDKSRALLGFGLSKSTGGGTFSGSYQRVSSWNDDGGXXXX-------DEGVTARSLSINSDGGGEIPRGLAAGGSDPPTAITHVMKSDRRSLGAAAE-----------GTTGVAAKRAFSWFLSFEDRQILKRRTILARISSLVLLTSFASDLDLITDWTFLHYGLAGQG-----------IVIRKLALVFAIMGTIMWALSTTEFSLMSKLKTMWKGNPLSRLQHVGLGWQLLANVFLEDVPQFVITIITRPTSVSGVLNLTASGLSLCAKIVKGVSSQRAPSLATQFMMIDQDPAVTRNLFKLR 338
            +AGY+SDGAASD S PG   A++          GDKSRAL G GLS S GGGTFSGSYQR+ SW  D  XXXX       D G   RSLSINSDGGG       AG             +    LG A +           G +G       SW+LS +DRQ+LKRRTIL+RI+ +VLL+SF  DLDLITDW FL YGLAGQG            +IRKLAL FAI+GT+MWALSTTEFSLMSKLK MWK      LQHVGLGWQLLANVFLEDVPQF+IT+ITRPTSV+GVLNL ASGLSLCAKI+ G+SSQRAPSL+TQF MIDQDPAVTRNLFKLR
Sbjct:   55 VAGYISDGAASDVSAPGEPAAAAL---------GDKSRALAGLGLSASKGGGTFSGSYQRLPSWGGDXXXXXXXXXXXXXDGGDVPRSLSINSDGGG-----FEAGTRXXXXXXXXXATARSTELGPAIKRRAPGKTSRGLGASGARGSGGHSWYLSAKDRQVLKRRTILSRITPIVLLSSFVGDLDLITDWMFLKYGLAGQGENTKAEGCLQRFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMWKV-----LQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIIHGISSQRAPSLSTQFKMIDQDPAVTRNLFKLR 374

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BLAST of mRNA_H-canaliculatus_F_contig1529.3924.1 vs. uniprot
Match: D7FK13_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK13_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.180e-43
Identity = 107/256 (41.80%), Postives = 154/256 (60.16%), Query Frame = 0

Query:  171 RQILKRRTILARISSLVLLTSFASDLDLITDWTFLHYGLAGQGIVIRKLALVFAIMGTIMWALSTTEFSLMSKLKTMW--KGNPLSRLQHVGLGWQLLANVFLEDVPQFVITIITRPTSVSGVLNLTASGLSLCAKIVKGVSSQRAPSLATQFMMIDQDPAVTRNLFKLRDEAKKKAKSAEQLVYLA----WENRRVAGEEKA----AAVFRVLQMDPTFVNGDLDYMRPDLFAGSRLYITSCSLTGSIPSELGSL 416
            R+ LKR  I  +++ L +LTS  SDLDL  DW FL  GL     ++  +A V  ++GT+M+ L T EF  +S+  T W  +G  LS LQHV LGWQLL NV +ED+PQ VIT +T PTSV+GVLN+  +G +L AK+ +G +++    +++Q  MID DP V ++L   R +A++ A +A  L  L      EN  +  E  +    A  F+V+Q+DP F+NG+L Y+R  L   SRL +    L GS+P  LG +
Sbjct:  122 RRTLKRSAIWEKVTPLTVLTSVVSDLDLFADWYFLQEGLEDAQELVADVAFVLTVVGTVMYVLLTLEFHPVSEAWT-WCRRGRALSPLQHVPLGWQLLLNVVVEDIPQLVITWVTSPTSVAGVLNIATAGFALLAKMAEGFATRTDLPMSSQLRMIDTDPGVVQHLLNARHKAEELAANAASLAVLVNRFGAENAAMPTERNSKRLLATAFQVMQVDPGFLNGELGYIREKLEV-SRLNLGRFGLKGSLPPSLGDV 375

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BLAST of mRNA_H-canaliculatus_F_contig1529.3924.1 vs. uniprot
Match: A0A6H5JP38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP38_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 1.610e-15
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 0

Query:  363 GEEKAAAVFRVLQMDPTFVNGDLDYMRPDLFAGSRLYITSCSLT 406
            GE+KAAAVF+VLQMDPTFV GDL+YMR DLF+GSRLYITSCSLT
Sbjct:   13 GEQKAAAVFQVLQMDPTFVGGDLEYMRADLFSGSRLYITSCSLT 56

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1529.3924.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1529.3924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7G1J8_ECTSI	2.520e-157	69.53	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5JNU7_9PHAE	8.780e-105	60.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FK13_ECTSI	1.180e-43	41.80	Hypothetical leucine rich repeat protein n=2 Tax=E...	[more]
A0A6H5JP38_9PHAE	1.610e-15	86.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00019	LEURICHRPT	coord: 467..480 score: 54.54 coord: 512..525 score: 54.98
None	No IPR available	PANTHER	PTHR27000:SF224	RECEPTOR PROTEIN-TYROSINE KINASE CEPR1	coord: 371..461 coord: 453..600
None	No IPR available	PANTHER	PTHR27000:SF224	RECEPTOR PROTEIN-TYROSINE KINASE CEPR1	coord: 398..532
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 453..600
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 398..532 coord: 371..461
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 219..240
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 241..637
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..178
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 200..218
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 179..199
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 397..590
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 512..535 e-value: 34.0 score: 8.9 coord: 464..488 e-value: 14.0 score: 12.0 coord: 416..440 e-value: 60.0 score: 6.9
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 419..477 e-value: 1.5E-7 score: 31.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 392..600 e-value: 4.9E-53 score: 182.3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1529	contig	H-canaliculatus_F_contig1529:7745..21878 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1529.3924.1	mRNA_H-canaliculatus_F_contig1529.3924.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1529 7745..21878 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1529.3924.1 ID=prot_H-canaliculatus_F_contig1529.3924.1|Name=mRNA_H-canaliculatus_F_contig1529.3924.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=638bp
LPSSHFLRRRLTPLHAATPRPSTATRAIIAGYVSDGAASDASDPGVFGAS
STTAASFATTPGDKSRALLGFGLSKSTGGGTFSGSYQRVSSWNDDGGGGG
GDEGVTARSLSINSDGGGEIPRGLAAGGSDPPTAITHVMKSDRRSLGAAA
EGTTGVAAKRAFSWFLSFEDRQILKRRTILARISSLVLLTSFASDLDLIT
DWTFLHYGLAGQGIVIRKLALVFAIMGTIMWALSTTEFSLMSKLKTMWKG
NPLSRLQHVGLGWQLLANVFLEDVPQFVITIITRPTSVSGVLNLTASGLS
LCAKIVKGVSSQRAPSLATQFMMIDQDPAVTRNLFKLRDEAKKKAKSAEQ
LVYLAWENRRVAGEEKAAAVFRVLQMDPTFVNGDLDYMRPDLFAGSRLYI
TSCSLTGSIPSELGSLTVLKTLVLCRNQLSGTIPAELGNLFNLKELNLSE
NILSGPIPVELGQLSSLTTLDLSTNALTGSIPVELSDLKLLITVLLGRNR
LTGEIPPELSSLPALQELDLSQNQLTGENSDPFCPEYHRCSPIPEEFGET
LDNLRSFSVGNNMLTGEVPMSLGKLTQLKSLVVASNMLTGERETEEQLKL
ELHPECLTDFLPQEELEEEEEEEEEVDEGMPTQELLV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt
IPR003591	Leu-rich_rpt_typical-subtyp