prot_H-canaliculatus_F_contig15228.3893.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15228.3893.1
Unique Nameprot_H-canaliculatus_F_contig15228.3893.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length129
Homology
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: D8LEI3_ECTSI (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI3_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 1.760e-72
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0
Query:   17 VEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVEATQKF 122
            V++TVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTV+ATQKF
Sbjct:   24 VDITVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVDATQKF 129          
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: A0A6H5JAT4_9PHAE (CAF1C_H4-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT4_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 2.550e-70
Identity = 104/107 (97.20%), Postives = 107/107 (100.00%), Query Frame = 0
Query:   16 QVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVEATQKF 122
            +V+VTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTV+ATQKF
Sbjct:  185 KVDVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVDATQKF 291          
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: A0A835ZEH9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEH9_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.480e-49
Identity = 76/106 (71.70%), Postives = 94/106 (88.68%), Query Frame = 0
Query:   16 QVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVEATQK 121
            ++E++VK+NH+GEVNRARYMPQN FVIATK P ADVCVFD+S+HPSVP +N+  RPEHRC GHTKEG+GL+WNPH EG LLSGS+D +VCYWD+K AG+TV AT++
Sbjct:  126 KIEISVKLNHEGEVNRARYMPQNPFVIATKGPHADVCVFDVSRHPSVPANNT-VRPEHRCTGHTKEGFGLAWNPHKEGGLLSGSEDMVVCYWDLKEAGKTVAATRQ 230          
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: A0A7S2XZP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZP9_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.440e-48
Identity = 77/115 (66.96%), Postives = 89/115 (77.39%), Query Frame = 0
Query:   16 QVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKG-AGQTVEATQKFGARSGSV 129
            +VE+ V+INHDGEVNRARYMPQN FVIATKSPS+DV VFD++KHPSVPP N+ C+PEHRC GHTKEGYGL W+PH  G L+SGSDD  +C W+I     QTVE  Q F   S  V
Sbjct:  124 KVEIQVRINHDGEVNRARYMPQNPFVIATKSPSSDVFVFDVTKHPSVPPPNTPCKPEHRCTGHTKEGYGLCWSPHQAGLLVSGSDDAKICLWEIGAKTPQTVEPVQMFNRHSSVV 238          
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: A0A6G0XTN1_9STRA (CAF1C_H4-bd domain-containing protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XTN1_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.520e-44
Identity = 68/107 (63.55%), Postives = 84/107 (78.50%), Query Frame = 0
Query:   16 QVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVEATQKF 122
            +VEV +KINH+GEVNRARYMPQNE  +ATK+ S++V +FD+SKHPS P   SGC P+ RC GHTKEGYGL WNPH    L+SGSDDG+VC WD+K AG+ V+   K+
Sbjct:  124 KVEVQIKINHEGEVNRARYMPQNELFVATKTVSSEVYIFDVSKHPSTPAEGSGCNPDFRCLGHTKEGYGLCWNPHESHHLISGSDDGVVCEWDLKNAGKQVQPLNKY 230          
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: A0A3R7A5Y3_9STRA (CAF1C_H4-bd domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7A5Y3_9STRA)

HSP 1 Score: 154 bits (390), Expect = 7.150e-44
Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 0
Query:   16 QVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVEATQKF 122
            +VEV +KINH GEVNRARYMPQN+ ++ATK+ S+DV +FDISKHPS P   SGC P+ RC GHTKEGYGL W+PH    L+SGSDDG+VC WD+  AG+ V    K+
Sbjct:  125 KVEVQIKINHAGEVNRARYMPQNDLIVATKTVSSDVYIFDISKHPSTPAEGSGCNPDFRCIGHTKEGYGLCWDPHQTHHLISGSDDGIVCEWDLANAGKQVHPLNKY 231          
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: F0YI25_AURAN (Uncharacterized protein MUT11 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI25_AURAN)

HSP 1 Score: 155 bits (393), Expect = 1.990e-43
Identity = 68/101 (67.33%), Postives = 81/101 (80.20%), Query Frame = 0
Query:   16 QVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTV 116
            ++E+ +KI H GEVNRARYMPQN F++ATKSP ADV VFD+SKHPSVP +  G  PEH C GH+KEGYGLSWNPH  G+LLSGSDD  +C WD+  AGQ+V
Sbjct:  106 KIEIKIKILHQGEVNRARYMPQNPFIVATKSPCADVFVFDMSKHPSVPSAGKGFCPEHHCTGHSKEGYGLSWNPHRTGQLLSGSDDAQICLWDVNEAGQSV 206          
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: A0A067C0K8_SAPPC (Histone-binding protein RBBP4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C0K8_SAPPC)

HSP 1 Score: 155 bits (391), Expect = 6.380e-43
Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 0
Query:   16 QVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVEATQKF 122
            +VEV +KINHDGEVNRARYMP NE ++ATK+ S++V VFDISKHPS P   +GC P++R  GHTKEGYGL W+PH    L+SGSDDG+VC WD+  AG+TV+   K+
Sbjct:  122 KVEVQIKINHDGEVNRARYMPSNELIVATKTVSSEVYVFDISKHPSTPAEGTGCNPDYRLLGHTKEGYGLCWDPHQAHHLISGSDDGVVCEWDLANAGKTVQPLNKY 228          
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: A0A7S4E6Q4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6Q4_9STRA)

HSP 1 Score: 154 bits (389), Expect = 6.500e-43
Identity = 68/94 (72.34%), Postives = 80/94 (85.11%), Query Frame = 0
Query:   16 QVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDI 109
            ++E+ +KINH+GE+NRARYMPQN F++ATKSPS+DV VFDISKHPS+P   + C PEHRC GHTKEGYGLSWNPHV G LLSGSDD  +C WDI
Sbjct:  100 KMEINIKINHEGEINRARYMPQNPFILATKSPSSDVFVFDISKHPSLPRDRNFC-PEHRCLGHTKEGYGLSWNPHVLGELLSGSDDCSICLWDI 192          
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Match: W4FMZ8_9STRA (Histone-binding protein RBBP4 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FMZ8_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.290e-42
Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 0
Query:   16 QVEVTVKINHDGEVNRARYMPQNEFVIATKSPSADVCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSDDGLVCYWDIKGAGQTVEATQKF 122
            +VEV +KINH GEVNRARYMPQN+ ++ATK+ S+DV +FDISKHPS P   SGC P+ RC GHTKEGYGL W+PH    L+SGSDDG+VC WD+  AG+ V    K+
Sbjct:  125 KVEVQIKINHAGEVNRARYMPQNDLIVATKTVSSDVYIFDISKHPSTPAEGSGCNPDFRCIGHTKEGYGLCWDPHQTHHLISGSDDGIVCEWDLANAGKQVHPLNKY 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15228.3893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEI3_ECTSI1.760e-7297.17CAF1C_H4-bd domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JAT4_9PHAE2.550e-7097.20CAF1C_H4-bd domain-containing protein n=1 Tax=Ecto... [more]
A0A835ZEH9_9STRA1.480e-4971.70WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2XZP9_9STRA1.440e-4866.96Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6G0XTN1_9STRA1.520e-4463.55CAF1C_H4-bd domain-containing protein n=9 Tax=Apha... [more]
A0A3R7A5Y3_9STRA7.150e-4462.62CAF1C_H4-bd domain-containing protein n=4 Tax=Apha... [more]
F0YI25_AURAN1.990e-4367.33Uncharacterized protein MUT11 n=1 Tax=Aureococcus ... [more]
A0A067C0K8_SAPPC6.380e-4362.62Histone-binding protein RBBP4 n=4 Tax=Saprolegniac... [more]
A0A7S4E6Q4_9STRA6.500e-4372.34Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
W4FMZ8_9STRA1.290e-4262.62Histone-binding protein RBBP4 n=1 Tax=Aphanomyces ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 16..55
e-value: 14.0
score: 9.7
coord: 68..108
e-value: 2.6E-5
score: 33.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 75..117
score: 10.107
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..129
e-value: 4.2E-34
score: 120.3
NoneNo IPR availablePANTHERPTHR22850:SF192coord: 16..128
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 16..128
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 75..117
score: 9.837
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 21..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15228contigH-canaliculatus_F_contig15228:303..1400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15228.3893.1mRNA_H-canaliculatus_F_contig15228.3893.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15228 303..1400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15228.3893.1 ID=prot_H-canaliculatus_F_contig15228.3893.1|Name=mRNA_H-canaliculatus_F_contig15228.3893.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=129bp
THRSRTHPRPHPLPPQVEVTVKINHDGEVNRARYMPQNEFVIATKSPSAD
VCVFDISKHPSVPPSNSGCRPEHRCKGHTKEGYGLSWNPHVEGRLLSGSD
DGLVCYWDIKGAGQTVEATQKFGARSGSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat