prot_H-canaliculatus_F_contig1518.3869.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1518.3869.1
Unique Nameprot_H-canaliculatus_F_contig1518.3869.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length183
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1518.3869.1 vs. uniprot
Match: A0A6H5JLT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT0_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 4.380e-28
Identity = 81/169 (47.93%), Postives = 106/169 (62.72%), Query Frame = 0 
Query:   23 LYESARQVIEGASVAAGTPDVEATGGPN---TTRRPKYS--LKDKLDRLVEEANHGGGTGKKKQQQATTAVRGNGDTVLAVRA-HGDIS--SENDGN-TGEERQEGGGRNDECLGLMAEAFADDLDLLRKDEHFRGSATNLAAMADMMRCLAGGLSSTEQKMLLENVSR 182
            LY++ARQ I  AS  AG    EA G        +RP+++  L  KL R VEE  +    G++   Q T  V+ +G +    R  H ++   +E+ G+ +G E      + DECLGLMAEAFADDLDLLRKDEHF GSA ++AAMADMMRC+AGGL S EQ+MLL+N +R
Sbjct:   10 LYDAARQAIRDAS--AGGAATEAAGRDQDAYVAKRPQHNDLLDKKLHRSVEEM-YQSTRGEQNSAQGTQDVQFSGISGNKKRQRHDEVEKPAEDAGDASGGEEGHATTQEDECLGLMAEAFADDLDLLRKDEHFGGSANDIAAMADMMRCIAGGLDSIEQRMLLDNAAR 175
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1518.3869.1 vs. uniprot
Match: D8LNF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF4_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.620e-16
Identity = 67/164 (40.85%), Postives = 85/164 (51.83%), Query Frame = 0 
Query:   17 SSSHRVLYESARQVIEGASVAAGTPDVEATGGPN---TTRRPKYS--LKDKLDRLVEEANHGGGTGKKKQQQATTAVRGNGDTVLAV-----------RAHGDISSENDGNTGEERQEGGG--RNDECLGLMAEAFADDLDLLRKDEHFRGSATNLAAMADMMR 162
            S S   LY++AR+ I  AS  AG    EA G         RP++   L  KL R VEE  H        + Q  ++ +G  D  L+            R  G+ +   D     + +EG    + DECLGLMAEAFADDLDLLRKD+HF GSA ++AAMADMMR
Sbjct:    4 SRSRLCLYDAAREAIRDAS--AGGAAAEAVGRDQDACVATRPQHDDVLDKKLHRSVEEMYHS------TRGQQNSSTQGTPDVQLSASDSGVGNKKRQRHDGEEAPTEDAGDASDGEEGHPTTQEDECLGLMAEAFADDLDLLRKDDHFGGSANDIAAMADMMR 159
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1518.3869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLT0_9PHAE4.380e-2847.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF4_ECTSI1.620e-1640.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1518contigH-canaliculatus_F_contig1518:19321..21100 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1518.3869.1mRNA_H-canaliculatus_F_contig1518.3869.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1518 18932..21824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1518.3869.1 ID=prot_H-canaliculatus_F_contig1518.3869.1|Name=mRNA_H-canaliculatus_F_contig1518.3869.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=183bp
MGETAMTAASARMDSSSSSHRVLYESARQVIEGASVAAGTPDVEATGGPN
TTRRPKYSLKDKLDRLVEEANHGGGTGKKKQQQATTAVRGNGDTVLAVRA
HGDISSENDGNTGEERQEGGGRNDECLGLMAEAFADDLDLLRKDEHFRGS
ATNLAAMADMMRCLAGGLSSTEQKMLLENVSR*
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