prot_H-canaliculatus_F_contig15152.3855.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15152.3855.1
Unique Nameprot_H-canaliculatus_F_contig15152.3855.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length58
Homology
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BLAST of mRNA_H-canaliculatus_F_contig15152.3855.1 vs. uniprot
Match: D7FMV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV8_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 2.380e-25
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 0 
Query:    1 MVFLLPIYEQGINDSPGASRLSMANLKEGGETLWSGVVFAYIFTFYFLYSLRREFLA 57
            MVFLLPIYEQGINDS GASRLSMANL+EGGETLWSGVVFAY+FT YFLYSLR+EF A
Sbjct:  162 MVFLLPIYEQGINDSEGASRLSMANLQEGGETLWSGVVFAYLFTIYFLYSLRKEFFA 218
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15152.3855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMV8_ECTSI2.380e-2589.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032880Calcium permeable stress-gated cation channel 1, N-terminal transmembrane domainPFAMPF13967RSN1_TMcoord: 2..54
e-value: 1.0E-7
score: 31.8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 32..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15152contigH-canaliculatus_F_contig15152:266..439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15152.3855.1mRNA_H-canaliculatus_F_contig15152.3855.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15152 263..439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15152.3855.1 ID=prot_H-canaliculatus_F_contig15152.3855.1|Name=mRNA_H-canaliculatus_F_contig15152.3855.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=58bp
MVFLLPIYEQGINDSPGASRLSMANLKEGGETLWSGVVFAYIFTFYFLYS
LRREFLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032880Csc1_N