prot_H-canaliculatus_F_contig1509.3825.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1509.3825.1
Unique Nameprot_H-canaliculatus_F_contig1509.3825.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length221
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1509.3825.1 vs. uniprot
Match: D8LCN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN7_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 3.530e-76
Identity = 135/270 (50.00%), Postives = 156/270 (57.78%), Query Frame = 0 
Query:   16 LLLDQASLAAGCTCLAVYYTPCDYVQGTAVPVPTTVVRATVLTRSVQTDINEDITYTADVTTVYSGS--DADEVSFITGGNSAACGVDLIIGEEYLLGLYPASANPFDSTD--VTGLLTVGACDLATPWSDIQADELADLEAGC-------------------------------------------------------PASGCNLL------CDDKQECVQYLSNGNYYCSDTCDNPDSCEDGKECTTRPRSWCRNSGFDGCPEKRKCR 220
            LLL+QA  A+ CTCLA Y TPC+Y QG      T V R T L++S QTDINED+T+T  V  VYSG     DE+SF+TGGNSA CGVDL IGEEYLLGLYPA  +PFDST     G LTVG CDLA  WSD+  DE ADLEAGC                                                       P + C         CDD QEC+QY  NG YYCSDTCD+P +CE+G+EC+TRPR WCR+SG+DGCPEKR+CR
Sbjct:   18 LLLNQAFHASACTCLAQYITPCEYAQG-IFTTTTVVFRGTALSKSAQTDINEDVTFTVQVNAVYSGDVDGQDEISFVTGGNSAICGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLTVGLCDLARVWSDVPDDEKADLEAGCGECDVSCGEFQECLLYEDGLESEYYCADTCDDPDRCADNETCVLTEVACIRAPCPPVASCEATENCDGACDDTQECLQYARNGKYYCSDTCDSPAACEEGEECSTRPRKWCRSSGYDGCPEKRRCR 286
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1509.3825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCN7_ECTSI3.530e-7650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.120coord: 43..160
e-value: 1.0E-6
score: 30.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..220
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.692
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 50..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1509contigH-canaliculatus_F_contig1509:3904..6755 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1509.3825.1mRNA_H-canaliculatus_F_contig1509.3825.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1509 2704..22237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1509.3825.1 ID=prot_H-canaliculatus_F_contig1509.3825.1|Name=mRNA_H-canaliculatus_F_contig1509.3825.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=221bp
MGISKIVAALAISSALLLDQASLAAGCTCLAVYYTPCDYVQGTAVPVPTT
VVRATVLTRSVQTDINEDITYTADVTTVYSGSDADEVSFITGGNSAACGV
DLIIGEEYLLGLYPASANPFDSTDVTGLLTVGACDLATPWSDIQADELAD
LEAGCPASGCNLLCDDKQECVQYLSNGNYYCSDTCDNPDSCEDGKECTTR
PRSWCRNSGFDGCPEKRKCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008993TIMP-like_OB-fold