prot_H-canaliculatus_F_contig150.3765.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig150.3765.1
Unique Nameprot_H-canaliculatus_F_contig150.3765.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length685
Homology
BLAST of mRNA_H-canaliculatus_F_contig150.3765.1 vs. uniprot
Match: D8LT62_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT62_ECTSI)

HSP 1 Score: 595 bits (1535), Expect = 8.380e-203
Identity = 450/678 (66.37%), Postives = 484/678 (71.39%), Query Frame = 0
Query:    1 MGLCVRSAEDEV---LSDVSTEVANFADKFVGDDAVRQISDALASNCSKTRILLDRNCIGADGAAALGDMLKARHKC--IFLEWNNIGTYEPGVQRLADGLEVNGSLTSLVLCNNHIDAQGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDHLQENIQAALCDRESGALVKTALWDDLHVSRGKAEQLEARLRRQALEEESHKRLDRERELKWQEELVTAKQDSARHRLDYERQMEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDSTKQTLLETRRDTTRQAERLQDALDRANEDRRITQGELEHVRDVFERELAGLKEELRAVNTEIDATRRTATRATAEAEQATALHETARAEVRLTRERADEAVAAVARATRDGATALEETRRMYEERVEASQVDRDARVKAAEGSARAAAHERQRAEAARQAASKELARLQVSVEERLSQSEKRVVAEAQKQFDLELAELRERIDAVQKTRXXXXXXXXXXLASLEGLRLRSAADLREFGRELAAAGKELESSRDTARESESRASKLETEIGVLRRAMEGLQNRLEEAEKDKRQASELQSSSTCKVQAQHESELKDLERRLSEVRKACGAAEKLAKENEEKASAFRQAHLQSLCLLEKAVGHALEEAVVSARQCTGG 673
            M   VR A+DEV   L+D ST+ ANFADKFVGD+AVRQISDALASNCSKTR+LLDRNC+GADGAAALGDMLK       + LEWNNIGT + G+QRLADGLEVN SLT+LVLCNNHI AQGA+CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  HLQE+IQAAL DR+SG LVKTALWDDLHVSRGKAEQLEARLRRQALEEESHKRLDRERE KW+E+LVT KQDSARHRLD+ERQM AS                                     ELD TKQTLLETRR+ TRQ ERL                                     AV TEIDA+RR ATRA AEAEQATALHETARAEVRLT ERADEAVAAVARATRDGATALEETRRMYEERVEASQ DRDARVK+AE  A           A RQAASKELARLQVSVEER+SQ+EKRVV EAQKQFDLELAELRERIDAVQK            LASLE LRLRS A+LR+FGRELAAAG+ELE SR++AR SE +ASKL+ ++GV +R  EG                               SELKD+ERRLSE R AC AAEK AKENEE+ SA RQ HL SL LLE  VG AL +AV SARQ   G
Sbjct:    1 MSSTVRLADDEVDRLLNDGSTD-ANFADKFVGDEAVRQISDALASNCSKTRVLLDRNCVGADGAAALGDMLKVNSSIASLSLEWNNIGTCDEGLQRLADGLEVNRSLTALVLCNNHITAQGASCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLQESIQAALSDRDSGNLVKTALWDDLHVSRGKAEQLEARLRRQALEEESHKRLDREREQKWKEDLVTVKQDSARHRLDFERQMGASAKQMAELEEQLIHERSRGSSLGNKLERESERREAIQGELDKTKQTLLETRRELTRQTERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTTEIDASRRAATRAKAEAEQATALHETARAEVRLTAERADEAVAAVARATRDGATALEETRRMYEERVEASQADRDARVKSAEERAXXXXXXXXXXXAVRQAASKELARLQVSVEERISQNEKRVVVEAQKQFDLELAELRERIDAVQKITESKEAQSREYLASLEDLRLRSTAELRDFGRELAAAGEELEKSRNSARNSEGKASKLQADLGVQQRVTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSELKDMERRLSEARAACRAAEKTAKENEERVSALRQVHLHSLRLLESTVGQALGDAVASARQIGSG 677          
BLAST of mRNA_H-canaliculatus_F_contig150.3765.1 vs. uniprot
Match: A0A6H5KCD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD5_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 8.610e-90
Identity = 206/333 (61.86%), Postives = 225/333 (67.57%), Query Frame = 0
Query:  341 VFERELAGLKEELRAVNTEIDATRRTATRATAEAEQATALHETARAEVRLTRERADEAVAAVARATRDGATALEETRRMYEERVEASQVDRDARVKAAEGSARAAAHERQRAEAARQAASKELARLQVSVEERLSQSEKRVVAEAQKQFDLELAELRERIDAVQKTRXXXXXXXXXXLASLEGLRLRSAADLREFGRELAAAGKELESSRDTARESESRASKLETEIGVLRRAMEGLQNRLEEAEKDKRQASELQSSSTCKVQAQHESELKDLERRLSEVRKACGAAEKLAKENEEKASAFRQAHLQSLCLLEKAVGHALEEAVVSARQCTGG 673
            +FE E+AGLKEELRAV                     TALHETARAEVRLT ERADEAVAAV RATRDGATALEETRRMYEERVEASQ DRDARVK+AE  A              QAASKELARLQVSVEERL+Q+EKRVVAEAQKQFDLEL ELRERIDAVQ+            LASLE LRLRS A+LR+FGRELAAAG+ELE SR++AR SE +ASKL+ ++GV +R  EGL                           QH SELKD+ERRLSE R AC AAEK AKENEE+ SA RQ HL SL LLE  VG AL +AV SARQ   G
Sbjct:    1 MFENEVAGLKEELRAV--------------------ITALHETARAEVRLTAERADEAVAAVTRATRDGATALEETRRMYEERVEASQADRDARVKSAEERAXXXXXXXXXXXXXXQAASKELARLQVSVEERLAQNEKRVVAEAQKQFDLELVELRERIDAVQRITESKEAQSREYLASLEELRLRSTAELRDFGRELAAAGEELEKSRNSARNSEGKASKLQADLGVQQRVAEGLXXXXXXXXXXXXXXXXXXXXXXXXXXXQHGSELKDMERRLSEARAACRAAEKNAKENEERVSALRQVHLHSLRLLESTVGQALGDAVASARQIGSG 313          
BLAST of mRNA_H-canaliculatus_F_contig150.3765.1 vs. uniprot
Match: A0A836CKE5_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE5_9STRA)

HSP 1 Score: 178 bits (451), Expect = 5.840e-44
Identity = 240/697 (34.43%), Postives = 336/697 (48.21%), Query Frame = 0
Query:   15 DVSTEVANFADKFVGDDAVRQISDALA-SNCSKTRILLDRNCIGADGAAALGDMLKARHKC--IFLEWNNIGTYEPGVQRLADGLEVNGSLTSLVLCNNHIDAQGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------DDHLQENIQAALCDRESGALVKTALWDDLHVSRGKAEQLEARLRRQALEEESHKRLDRERELKWQEELVTAKQDSARHRLDYERQMEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDSTKQTLLETRRDTTRQAERLQDALDRANEDRRITQGELEHVRDVFERELAGLKEELRAVNTEIDATRRTATRATAEAEQATALHETARAEVRLTRERADEAVAAVARATRDGATALEETRRMYEERVEASQVDRDARVKAAEGSARAAAHERQRAEAARQAASKELARLQVSVEERLSQSEKRVVAEAQKQFDLELAELRERIDAVQKTRXXXXXXXXXXLASLEGLRLRSAADLREFGRELAAAGKELESSRDTARESESRASKLETEIGVLRRAMEGLQNRLEEAEKDKRQASELQSSSTCKVQAQHESELKDLERRLSEVRKACGAAEKLAKENEEKASAFRQAHLQSLCLLEKAVGHALEEAVVSAR 668
            D   +  N +D  + +  V+ I+D+L  ++C++  ++L  + + A+GAAAL D L+       + LEWN+IG +E G++                  NN I   G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                               D  L ENI+A L DR +   +  A  DDLHV+R +AEQLEARLRR A +E + +  + ERE +W  EL                                                                +   ET+R   RQ ERLQ A+D ANEDRR  Q + E  R   ++ELA   EE R + TE+D   R   R     +Q  A  +TA AEVRL  ER DE  A  ARA  +G  A+EET                                            +ELARLQV +EE+++++E+ V  E + ++D E+ EL ERI++VQK R           A L+  R +SAA+LRE  +EL     +L+++R+ +R +E +A+KL T++GVL+R  E LQ++ +  E+D++  +E    ST K+QAQH SE++ LER+L E R A  A E    +  E+ +A R  H ++L +L+K++  +L EA  +AR
Sbjct:   28 DYDQDELNLSDTILNEADVQHIADSLRHTDCTQHALILRGSQVSAEGAAALADALRVNDSITTVSLEWNSIGLFESGLEXXXXXXXXXXXXXXXXXRNNCISPAGGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLAGNKAMLCLTIVLPQICHWWTPHEKRNQRSATVPALHFVTPLLKVDPMLLENIEALLNDRGAAGELALATRDDLHVARERAEQLEARLRRTAADEAALRSKEAEREREWHAELA---------------------------------------------------------------RIHAETKRGLERQVERLQAAVDGANEDRRSEQRQSELARSSLDKELAETVEEARRLQTELDRALRNGKRLQTLTDQLQASLDTAHAEVRLLHERVDEHAALAARAASEGRAAVEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRELARLQVLLEEKVAEAERSVRDEQRNRYDAEVKELVERIESVQKMRELQEGELKGLTAQLDAQRSQSAAELRELNKELLRYRDQLDAAREGSRAAEGKAAKLSTDVGVLQRKAEVLQSKCDSLERDRQHTAEAHQGSTDKLQAQHASEVRALERQLQEARAAISALEGKLTDCAEEMAAARAQHTRTLGVLDKSIAQSLAEAFEAAR 661          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig150.3765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LT62_ECTSI8.380e-20366.37Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KCD5_9PHAE8.610e-9061.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKE5_9STRA5.840e-4434.43Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 546..594
NoneNo IPR availableCOILSCoilCoilcoord: 204..224
NoneNo IPR availableCOILSCoilCoilcoord: 486..513
NoneNo IPR availableCOILSCoilCoilcoord: 442..469
NoneNo IPR availableCOILSCoilCoilcoord: 339..387
NoneNo IPR availableCOILSCoilCoilcoord: 247..334
NoneNo IPR availableCOILSCoilCoilcoord: 603..630
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 99..126
e-value: 2.7
score: 14.1
coord: 127..154
e-value: 0.041
score: 23.0
coord: 43..70
e-value: 9.3
score: 10.3
NoneNo IPR availablePANTHERPTHR23170NY-REN-58 ANTIGENcoord: 25..182
NoneNo IPR availablePANTHERPTHR23170:SF3LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45coord: 25..182
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 27..176
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 81..195
e-value: 7.4E-26
score: 92.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 14..80
e-value: 2.3E-7
score: 32.5
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 127..148
e-value: 3.8E-6
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig150contigH-canaliculatus_F_contig150:17243..24310 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig150.3765.1mRNA_H-canaliculatus_F_contig150.3765.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig150 17122..24455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig150.3765.1 ID=prot_H-canaliculatus_F_contig150.3765.1|Name=mRNA_H-canaliculatus_F_contig150.3765.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=685bp
MGLCVRSAEDEVLSDVSTEVANFADKFVGDDAVRQISDALASNCSKTRIL
LDRNCIGADGAAALGDMLKARHKCIFLEWNNIGTYEPGVQRLADGLEVNG
SLTSLVLCNNHIDAQGATCLARALRANSTLTELDLRWNEVGNEGARAIRD
SLDTNRSLTCVKLSGNKVDDHLQENIQAALCDRESGALVKTALWDDLHVS
RGKAEQLEARLRRQALEEESHKRLDRERELKWQEELVTAKQDSARHRLDY
ERQMEASAKHVAELEEQLVHERSRTSNLESKLEREGERREALQEELDSTK
QTLLETRRDTTRQAERLQDALDRANEDRRITQGELEHVRDVFERELAGLK
EELRAVNTEIDATRRTATRATAEAEQATALHETARAEVRLTRERADEAVA
AVARATRDGATALEETRRMYEERVEASQVDRDARVKAAEGSARAAAHERQ
RAEAARQAASKELARLQVSVEERLSQSEKRVVAEAQKQFDLELAELRERI
DAVQKTRDLQEAQARENLASLEGLRLRSAADLREFGRELAAAGKELESSR
DTARESESRASKLETEIGVLRRAMEGLQNRLEEAEKDKRQASELQSSSTC
KVQAQHESELKDLERRLSEVRKACGAAEKLAKENEEKASAFRQAHLQSLC
LLEKAVGHALEEAVVSARQCTGGGSSGAVGGQGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf