prot_H-canaliculatus_F_contig15.3751.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15.3751.1
Unique Nameprot_H-canaliculatus_F_contig15.3751.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length260
Homology
BLAST of mRNA_H-canaliculatus_F_contig15.3751.1 vs. uniprot
Match: A0A6H5KV87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV87_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 2.530e-125
Identity = 190/257 (73.93%), Postives = 218/257 (84.82%), Query Frame = 0
Query:    3 KAQPPAALAATVAFLAGASYILWRRSRSIEDDEEEEWEPVDRDHVVKFFQVITQQSHQNISQFNQQIAQYRGKVPEQHLTDLAVGQFEDQLTKVQEQVLAGMGISSEDMEDASKYYEAEGDTQVKEQMQMLRRLYLAVSKLPSDEQETELPDDLTADKMVTVVKAFFKASNGVLESVIQELLAKGENLADPGTAMKMTMAIQEKNGPATDEAIKRFNLDSSTIGPAMEKYGEHPEIKNAMLVGSEEQREILRAYGLA 259
            +AQP  ALA  VAF AG +YILWRR+ S+ D+E EEWEPVDR HVVKFFQ++ QQ HQ+I  FNQQIAQYRGKVPEQ LTDLAVG FED L K Q QV  GMGIS EDMEDASKYYE +GD QVKEQ++ L+ LYL VS LP+DE+E ELPDDLT +KMVTVV AFFKASN V+ESV+QELLAKGE+++ P TAMKM+M IQE+NGPATDEAIKRFNL+S+TIGPAMEK+ EHPEIK A++VGSEEQ +ILRAYGLA
Sbjct:  132 RAQPRTALATMVAFGAGVAYILWRRAGSMGDEEMEEWEPVDRSHVVKFFQILNQQLHQSIMSFNQQIAQYRGKVPEQQLTDLAVGHFEDSLAKTQAQVSVGMGISLEDMEDASKYYEEKGDPQVKEQLRHLKHLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVVESVVQELLAKGEDISSPETAMKMSMIIQERNGPATDEAIKRFNLNSTTIGPAMEKFQEHPEIKTAIMVGSEEQHQILRAYGLA 388          
BLAST of mRNA_H-canaliculatus_F_contig15.3751.1 vs. uniprot
Match: D7FYT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT1_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 2.600e-114
Identity = 169/226 (74.78%), Postives = 195/226 (86.28%), Query Frame = 0
Query:   33 DDEEEEWEPVDRDHVVKFFQVITQQSHQNISQFNQQIAQYRGKVPEQHLTDLAVGQFEDQLTKVQEQVLAGMGISSEDMEDASKYYEAEGDTQVKEQMQMLRRLYLAVSKLPSDEQETELPDDLTADKMVTVVKAFFKASNGVLESVIQELLAKGENLADPGTAMKMTMAIQEKNGPATDEAIKRFNLDSSTIGPAMEKYGEHPEIKNAMLVGSEEQREILRAYGL 258
            D+E EEWEPVDRDHVVKFFQ++ QQSHQ+I  FNQQI QYRGKVPEQHLTDLAVG FED L K Q Q+  GMGIS EDMEDASKYYE +GD QVKEQ++ L+ LYL VS LP+DE+E ELPDDLT +KMVTVV AFFKASN V+ESV+QELLAKG ++ +P TAMKM+MAIQEK+GPATDEAIKRFNL+S+TIGPAM+K+ EH EIK A++VGSEEQ +ILR YGL
Sbjct:    3 DEEMEEWEPVDRDHVVKFFQILNQQSHQSIMSFNQQIVQYRGKVPEQHLTDLAVGHFEDSLAKTQAQISVGMGISLEDMEDASKYYEEKGDQQVKEQLRHLKNLYLTVSNLPTDEEEPELPDDLTVEKMVTVVTAFFKASNNVIESVVQELLAKGGDVTNPETAMKMSMAIQEKSGPATDEAIKRFNLNSTTIGPAMDKFREHEEIKTAIMVGSEEQHQILRTYGL 228          
BLAST of mRNA_H-canaliculatus_F_contig15.3751.1 vs. uniprot
Match: A0A6V1QE83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QE83_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 4.090e-13
Identity = 58/240 (24.17%), Postives = 114/240 (47.50%), Query Frame = 0
Query:   12 ATVAFLAGASYILWRRSRS------IEDDEEEEWEPVDRDHVVKFFQVITQQSHQNISQFNQQIAQYRGKV-------PEQHLTDLAVGQFEDQLTKVQEQVLAGMGISSEDMEDASKYYEAEGDTQVKEQMQMLRRLYLAVSKLPSDEQETELPDDLTADKMVTVVKAFFKASNGVLESVIQELLAKGENLADPGTAMKMTMAIQEKNGPATDEAIKRFNLDSSTIGPAMEKYGEHPEI 238
            A +A L+ ASY L+ +         ++D +  E   + +  V++ F  I Q     + +  QQ+ Q   ++       PE+ +      +FE  L KV+EQVL       +++E+A++Y+E +GD +VK  ++ L  +Y A+S      ++ E P DLT +K + ++  +F + +  L  +++E   KG     P    +M   +  +      + ++   LD+      ++K+ E PE+
Sbjct:   13 AALAALSAASYFLFFKKEGKTVTDGVDDVDVIELPDITKAQVLEIFTTINQNMQAKVRELTQQLDQISQQMKAAGQALPEKEIHAYLSQEFESHLKKVEEQVLEKYKTDEDELEEATEYFEEQGDEEVKAVVRQLEVMYEAMS---GTAKKKEAPADLTREKFLALLPVYFGSMSKALAGLVEEAARKGITPQSP----EMQQLVATQLDARALKTMQEQGLDNEVFNAGLQKFHEDPEV 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15.3751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KV87_9PHAE2.530e-12573.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYT1_ECTSI2.600e-11474.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1QE83_HETAK4.090e-1324.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15contigH-canaliculatus_F_contig15:16554..22831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15.3751.1mRNA_H-canaliculatus_F_contig15.3751.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15 16497..24538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15.3751.1 ID=prot_H-canaliculatus_F_contig15.3751.1|Name=mRNA_H-canaliculatus_F_contig15.3751.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=260bp
MAKAQPPAALAATVAFLAGASYILWRRSRSIEDDEEEEWEPVDRDHVVKF
FQVITQQSHQNISQFNQQIAQYRGKVPEQHLTDLAVGQFEDQLTKVQEQV
LAGMGISSEDMEDASKYYEAEGDTQVKEQMQMLRRLYLAVSKLPSDEQET
ELPDDLTADKMVTVVKAFFKASNGVLESVIQELLAKGENLADPGTAMKMT
MAIQEKNGPATDEAIKRFNLDSSTIGPAMEKYGEHPEIKNAMLVGSEEQR
EILRAYGLA*
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