prot_H-canaliculatus_F_contig1489.3688.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1489.3688.1
Unique Nameprot_H-canaliculatus_F_contig1489.3688.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length421
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3688.1 vs. uniprot
Match: D8LTT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT2_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 2.230e-27
Identity = 81/124 (65.32%), Postives = 89/124 (71.77%), Query Frame = 0 
Query:  149 LTDQRGGGHAGGDFLRRRPFPGSSWAASGGGWGVNGGLDRGGLATLEGRETGGDTFRSASWADKLVVKREEQSVLVKQLERELASTVSALKDERKDRRNQTEALKRKLGEVRGAVGDREAELER 272
            L ++ GG  AGG FL      GSSWA  GG    +GG   GGLA       GGD FRSASWA+KLV KREEQSVLVKQLERELASTVSALKDER++RR QTE L+RKL E R  VGDREAEL+R
Sbjct:  471 LVEREGG--AGGRFL------GSSWAGVGG---SSGGYQLGGLAAAG---KGGDAFRSASWAEKLVTKREEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRATVGDREAELQR 580
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3688.1 vs. uniprot
Match: A0A6H5KDC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC5_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 9.820e-22
Identity = 69/103 (66.99%), Postives = 74/103 (71.84%), Query Frame = 0 
Query:  170 GSSWAASGGGWGVNGGLDRGGLATLEGRETGGDTFRSASWADKLVVKREEQSVLVKQLERELASTVSALKDERKDRRNQTEALKRKLGEVRGAVGDREAELER 272
            GSSWA  GG    +G    GG A       GG  F SASWA KLV KREEQSVLVKQLERELASTVSALKDER++RR QTE L+RKL E R AVG REAEL+R
Sbjct:  475 GSSWAGVGG---SSGSYHLGGRAAAG---EGGGAFSSASWAAKLVTKREEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRAAVGYREAELQR 571
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1489.3688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTT2_ECTSI2.230e-2765.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDC5_9PHAE9.820e-2266.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 210..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1489contigH-canaliculatus_F_contig1489:22657..24436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1489.3688.1mRNA_H-canaliculatus_F_contig1489.3688.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1489 22657..25103 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1489.3688.1 ID=prot_H-canaliculatus_F_contig1489.3688.1|Name=mRNA_H-canaliculatus_F_contig1489.3688.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=421bp
GLARGWDGAQRRKSSRSSATADTSASTAVSTACGGDEARPVGVGGGRVAL
DQGFAEFSSAGRNGDISTKRFYGVEGDAPPPLQAAPTAAKPPPPPLSTAA
HHGRTPSTYFHARSTEAVTVTDDGCGGRDAAVDATSYRHDAGRDETRRLT
DQRGGGHAGGDFLRRRPFPGSSWAASGGGWGVNGGLDRGGLATLEGRETG
GDTFRSASWADKLVVKREEQSVLVKQLERELASTVSALKDERKDRRNQTE
ALKRKLGEVRGAVGDREAELERYVCVCARLSSGSSCTAARAPVAAAATAE
HWEMDLRCSEVRIFHKTSQQHRRNTHLRHCPSQGAFINSYRMKLGSDRQV
VDKNVKSCGQRREKRWTFSLLAARYDAGSSSRAFSERSVSFLLSSLADAC
ANSWHPSACVGRQCLSLTRS*
back to top