prot_H-canaliculatus_F_contig1475.3613.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1475.3613.1
Unique Nameprot_H-canaliculatus_F_contig1475.3613.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length302
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1475.3613.1 vs. uniprot
Match: D8LS28_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS28_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 5.090e-78
Identity = 152/231 (65.80%), Postives = 171/231 (74.03%), Query Frame = 0 
Query:    7 MAGFVRGTLHWLCDIMVLLLVGAFLAETSPSSPPGEATRAVACHSP----GARAVELLLAAFERLGVPVEWLREILMNEGGIAKGNTRVGGVLKRFRRRKRGVLASKQQQGQRRGRVCLEGATVSMSDFRVVDSKFASYKITV---TPGAGVGARWEVWRRMADMIKLKAALSKVSAPGVDLPPLPHSYRRSFDASRLTRRRRSIQHFLQVALEHSVLRSSDALIDFLSPE 230
            M   +   L WLC ++VL+LV A LAETSP+ P G A  A     P    G RA ELLLAA ERLG+PVEW R ++ + GG A  N   GGVL+RFR RKR  L SKQQ GQ R RV LEGA++S++D RVVDSKFA YKITV   T GA  GARWEVWRRMAD+IKLKAALSKVSA  V+LPPLPHSYRRSFDASRL RRRRSIQHFLQVA++   LR SDAL+DFLSPE
Sbjct:    1 MTAIIWVALQWLCSVLVLVLVSAVLAETSPAGP-GTAAAAGGGTPPRFSAGKRAFELLLAALERLGIPVEWTRGVV-DGGGTAGENRGRGGVLRRFRSRKRCALPSKQQPGQERVRVSLEGASLSLNDVRVVDSKFACYKITVATSTTGASAGARWEVWRRMADLIKLKAALSKVSAADVELPPLPHSYRRSFDASRLARRRRSIQHFLQVAVKQPALRDSDALLDFLSPE 229
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1475.3613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS28_ECTSI5.090e-7865.80PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 121..230
e-value: 9.5E-8
score: 41.8
IPR001683Phox homologous domainPFAMPF00787PXcoord: 127..229
e-value: 8.7E-13
score: 48.2
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 119..234
score: 11.368
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 122..246
e-value: 1.0E-17
score: 66.1
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 133..230
NoneNo IPR availablePANTHERPTHR45949:SF2SORTING NEXIN-4coord: 136..228
NoneNo IPR availablePANTHERPTHR45949FAMILY NOT NAMEDcoord: 136..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..32
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.721

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1475contigH-canaliculatus_F_contig1475:4..4342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1475.3613.1mRNA_H-canaliculatus_F_contig1475.3613.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1475 4..4362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1475.3613.1 ID=prot_H-canaliculatus_F_contig1475.3613.1|Name=mRNA_H-canaliculatus_F_contig1475.3613.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=302bp
MVGLASMAGFVRGTLHWLCDIMVLLLVGAFLAETSPSSPPGEATRAVACH
SPGARAVELLLAAFERLGVPVEWLREILMNEGGIAKGNTRVGGVLKRFRR
RKRGVLASKQQQGQRRGRVCLEGATVSMSDFRVVDSKFASYKITVTPGAG
VGARWEVWRRMADMIKLKAALSKVSAPGVDLPPLPHSYRRSFDASRLTRR
RRSIQHFLQVALEHSVLRSSDALIDFLSPEVAGAVSARPEDFVAENAAAS
DSVVAAGSGSETQTPFSRTRSSSAAAAAPPPPPPPPRSGTAGTPRERVES
GS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR001683Phox