prot_H-canaliculatus_F_contig14711.3600.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14711.3600.1
Unique Nameprot_H-canaliculatus_F_contig14711.3600.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length45
Homology
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: A0A6H5JFV2_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV2_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.610e-24
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 APRCPQHQRAGKLLTVRKTGLNKGRKFYACSLPRGEGCDFFMWAE 45
            APRCPQHQRAGKLLTVRKTGLNKGRKFYACSLPRGEGCDFFMWAE
Sbjct:  983 APRCPQHQRAGKLLTVRKTGLNKGRKFYACSLPRGEGCDFFMWAE 1027          
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: D7G8A0_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A0_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.610e-24
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 APRCPQHQRAGKLLTVRKTGLNKGRKFYACSLPRGEGCDFFMWAE 45
            APRCPQHQRAGKLLTVRKTGLNKGRKFYACSLPRGEGCDFFMWAE
Sbjct:  893 APRCPQHQRAGKLLTVRKTGLNKGRKFYACSLPRGEGCDFFMWAE 937          
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: W7TAC7_9STRA (DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAC7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.080e-13
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 APRCPQHQRAGKLLTVRKTGLNKGRKFYACSLPRGEGCDFFMWAE 45
            AP+C  H +  +LL V+K+G N+GR+FYACS PRGE CDFFMW E
Sbjct:  701 APKCTHHLQTARLLRVKKSGANRGRRFYACSFPRGEECDFFMWVE 745          
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: A0A482SRV8_9ARCH (RecQ family ATP-dependent DNA helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRV8_9ARCH)

HSP 1 Score: 68.2 bits (165), Expect = 3.360e-12
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    1 APRCPQHQRAGKLLTVRKTGLNKGRKFYACSLPRGEGCDFFMWAE 45
            AP CP H    KLLTV+KTG NKGR+FYAC  P  + C+FF+WAE
Sbjct:  130 APLCPGHSMPAKLLTVKKTGGNKGRRFYACCFPADQRCNFFLWAE 174          
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: A0A7S4MYJ9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYJ9_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.480e-12
Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    2 PRCPQHQRAGKLLTVRK-TGLNKGRKFYACSLPRGEGCDFFMWAE 45
            PRC +H R  +LLTVRK T  N+GRKFYACSLPRGE CD F W E
Sbjct:  111 PRCARHGRPCRLLTVRKNTRGNRGRKFYACSLPRGEQCDHFQWEE 155          
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: A0A7S4AC91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AC91_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.520e-12
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 APRCPQHQRAGKLLTVRKTGL-NKGRKFYACSLPRGEGCDFFMWAE 45
            AP+C +HQR  KL+ V+KT   N+GR+FYACS+PRGE CD F WA+
Sbjct:   66 APKCARHQRPCKLIKVKKTTSGNRGREFYACSMPRGEQCDHFQWAD 111          
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: A0A448ZEN4_9STRA (DNA helicase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEN4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.590e-12
Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 APRCPQHQRAGKLLTVRK-TGLNKGRKFYACSLPRGEGCDFFMWAE 45
            AP+C +HQR  KL+ VRK T  NKGR+FYACS+PRGE CD F WA+
Sbjct:  611 APKCARHQRPCKLIKVRKNTSGNKGREFYACSMPRGEQCDHFQWAD 656          
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: A0A7S2Q2M5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q2M5_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.590e-12
Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    2 PRCPQHQRAGKLLTVRK-TGLNKGRKFYACSLPRGEGCDFFMWAE 45
            P C +HQR  KLLTV+K T  NKGRKFY CS+PRGE CDFF W E
Sbjct:  630 PMCTRHQRPCKLLTVKKNTKGNKGRKFYVCSMPRGEQCDFFKWEE 674          
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: K0T7M4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T7M4_THAOC)

HSP 1 Score: 65.5 bits (158), Expect = 2.990e-11
Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    2 PRCPQHQRAGKLLTVRKTGL-NKGRKFYACSLPRGEGCDFFMWAE 45
            P C +HQR  KLLTV+K    NKGRKF+ CS+PRGE CDFF W E
Sbjct:  551 PLCTRHQRPCKLLTVKKNNKGNKGRKFFVCSMPRGEQCDFFKWEE 595          
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Match: A0A7S3QD83_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QD83_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 4.090e-11
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    2 PRCPQHQRAGKLLTVRK-TGLNKGRKFYACSLPRGEGCDFFMWAE 45
            P CP+H R  KLL V+K T  NKGRKFYACS+P+GE CDFF W +
Sbjct:  502 PVCPRHSRPCKLLIVKKNTTGNKGRKFYACSMPQGERCDFFQWED 546          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14711.3600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFV2_9PHAE1.610e-24100.00DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G8A0_ECTSI1.610e-24100.00DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
W7TAC7_9STRA1.080e-1362.22DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A482SRV8_9ARCH3.360e-1262.22RecQ family ATP-dependent DNA helicase n=1 Tax=arc... [more]
A0A7S4MYJ9_9STRA3.480e-1268.89Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A7S4AC91_9STRA4.520e-1260.87Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A448ZEN4_9STRA4.590e-1265.22DNA helicase n=1 Tax=Pseudo-nitzschia multistriata... [more]
A0A7S2Q2M5_9STRA4.590e-1268.89Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0T7M4_THAOC2.990e-1164.44Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3QD83_9STRA4.090e-1164.44Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 3..45
e-value: 1.5E-16
score: 60.2
NoneNo IPR availablePANTHERPTHR22993FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASEcoord: 2..45
NoneNo IPR availablePANTHERPTHR22993:SF10ENDONUCLEASE 8-LIKE 3coord: 2..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14711contigH-canaliculatus_F_contig14711:945..1790 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14711.3600.1mRNA_H-canaliculatus_F_contig14711.3600.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14711 945..1790 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14711.3600.1 ID=prot_H-canaliculatus_F_contig14711.3600.1|Name=mRNA_H-canaliculatus_F_contig14711.3600.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=45bp
APRCPQHQRAGKLLTVRKTGLNKGRKFYACSLPRGEGCDFFMWAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010666Znf_GRF