prot_H-canaliculatus_F_contig1470.3591.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1470.3591.1
Unique Nameprot_H-canaliculatus_F_contig1470.3591.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length602
Homology
BLAST of mRNA_H-canaliculatus_F_contig1470.3591.1 vs. uniprot
Match: A0A6H5JB67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB67_9PHAE)

HSP 1 Score: 543 bits (1398), Expect = 6.210e-182
Identity = 315/543 (58.01%), Postives = 366/543 (67.40%), Query Frame = 0
Query:   23 MAATR--ELLEKQSRGLHLEVKRAMRVATTTLRESDRVESRWRRPTRLDKPRIDPGAWHPGRVVQSHKDGGRVDVVFEDGDGERLSGIPVKHVRRAPSPLSLKSFLISRSGTEKDAMVS--LVEKSNSNDPSSS-TPTPMAVDELSSESRRELAHIACATKSLRSTWEDPVPIDQEMARLRMLGEEKMRCRPEWKGSFPTINFQATKRLPFGAGGMSGARAARAGRAAAVPTAARGRRRDRHVVRARSRTPSSRSLAITNGIAVQTNPGSR--------DCGRGQWDGTCPAEGETPTTQRKRTTGTTTATTAHRDH------------------IFCTPPLVPASLFNAQSRLVAAAVAYDRCVAGARDCLDRGAAAFRQARTYSEQQKAFEESTAVVGPSQPARAGYTDWRGRPVIGLQNATLDVVEAMDTWAAEWRTTRENETGLGEKSSGGMGKEQVAKDGAVEVVATAAPPFLWEGSPLVSTIVGQSAKLLASTPELGEWYGPGFPIKRNPFFLAYPLDDRPVTPRNAFVRTWVNGEM 534
            MAA R  E LE+QS+GLHLE+KRAM+VATTT RE DRVESRWRRPTRLDK +IDPGAWHPGRVVQSHK G RVDVVFEDGDGERLSGI  KHVR AP         +  SG + D + +  +  + NS D   S  PTP   + + S  RRELAHIACATKSLR TWE PVPI QEMARLRML E KMR RPEW+GSFP ++F ATKRLPFGAGGM+     +    AA   +A    RD H ++A+S   + R  + T    VQ++P S            R + D     +G+  T+    T   T A +A +                              +L  AQ++LV+AAVAYDRCVAG RDCLDRG AAFR ARTYSEQQKAFEESTA +GP+QPARAGY DWRG PV+GLQ+ATLDVVEAMD WAAEW   +  +T  G   +    +  V KDGAVE VA AAPPFLWEGSPLVST++GQSAKL+A  PEL EWYGPGFPI+RNPFFLAYP+DDRPVTPR+A VR WVNGE+
Sbjct:  238 MAAARHQETLEQQSQGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKGGDRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXLVSSGRDDDYVTAAGVTGRRNSCDRRPSCAPTPAPTELVCSAIRRELAHIACATKSLRCTWEVPVPISQEMARLRMLEERKMRSRPEWRGSFPLVDFSATKRLPFGAGGMARTVVRKVKNTAASAVSAVLATRD-HQLQAQS---TVRDDSRTRLRTVQSSPSSSLKMPMTVPQVQRDENDDRDLGQGDRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXXXXXXXXXXTALLAAQAKLVSAAVAYDRCVAGVRDCLDRGCAAFRLARTYSEQQKAFEESTATLGPAQPARAGYKDWRGSPVVGLQSATLDVVEAMDDWAAEWAVAKGGKTDAGGGDNAFAEEGVVLKDGAVEEVAVAAPPFLWEGSPLVSTVIGQSAKLVAGAPELKEWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGEV 776          
BLAST of mRNA_H-canaliculatus_F_contig1470.3591.1 vs. uniprot
Match: D8LCG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG8_ECTSI)

HSP 1 Score: 541 bits (1395), Expect = 1.710e-180
Identity = 318/534 (59.55%), Postives = 360/534 (67.42%), Query Frame = 0
Query:   23 MAATR--ELLEKQSRGLHLEVKRAMRVATTTLRESDRVESRWRRPTRLDKPRIDPGAWHPGRVVQSHKDGGRVDVVFEDGDGERLSGIPVKHVRRAPSPLSLKSFLISRSGTEKDAMVS--LVEKSNSNDPSSS-TPTPMAVDEL-SSESRRELAHIACATKSLRSTWEDPVPIDQEMARLRMLGEEKMRCRPEWKGSFPTINFQATKRLPFGAGGMSGARAARAGRAAAVPTAARGRRRDRHVV---------RARSRT----PSSRSLAITNGIAVQTNPGSRDCGRGQWDGTCPAEGETPTTQRKRTTGTTTATTAHRDHIFCTPPLVP---ASLFNAQSRLVAAAVAYDRCVAGARDCLDRGAAAFRQARTYSEQQKAFEESTAVVGPSQPARAGYTDWRGRPVIGLQNATLDVVEAMDTWAAEWRTTRENETGLGEKSSGGMGKEQVAKDGAVEVVATAAPPFLWEGSPLVSTIVGQSAKLLASTPELGEWYGPGFPIKRNPFFLAYPLDDRPVTPRNAFVRTWVNGEM 534
            MAA R  E LE+QSRGLHLE+KRAM+VATTT RE DRVESRWRRPTRLDK +IDPGAWHPGRVVQSHKDGGRVDVVFEDGDGERLSGI  KHVR AP                   +++  +  + NS D   S  PT    DEL  S SR ELAHIACATK LR TWEDPVPI QEMARLRML E KMR RPEW+GSFP ++F ATKRLPFGAGGM+     RA  AAA    A    RDR +          R R RT    PSS SL +   +       + D  +GQ D     +  T      R+ G   ++                   +L  AQ++LV+AA+AYDR VAGARDCLDRG AAFR ARTYSEQQKAFEESTA++GP+QPARAGYTDWRG PV+GLQ+ATLDVVEAMD WAAEW   +  +   G   +    +  V KDGAV  VA AAPPFLWEGSPLVSTI+GQSAKL+A  PEL  WYGPGFPI+RNPFFLAYP+DDRPVTPR+A VR WVNGE+
Sbjct:  320 MAAARHQETLEQQSRGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKDGGRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXXXXXXXXXXXVMAAGVSGRRNSCDRRPSCVPTSAPTDELVCSASRGELAHIACATKFLRCTWEDPVPISQEMARLRMLEERKMRGRPEWRGSFPLVDFSATKRLPFGAGGMARTGGRRARNAAASAATAAVATRDRQLQAQGTVHDDSRTRLRTVQWSPSS-SLKMPTTVPQVHREENIDRDQGQGDRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXGATALLEAQAKLVSAALAYDRYVAGARDCLDRGCAAFRLARTYSEQQKAFEESTAILGPAQPARAGYTDWRGSPVVGLQSATLDVVEAMDAWAAEWAADKGGKPDTGGGGNAFAEEGVVLKDGAVAEVAVAAPPFLWEGSPLVSTIIGQSAKLVAGAPELKGWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGEV 852          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1470.3591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JB67_9PHAE6.210e-18258.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCG8_ECTSI1.710e-18059.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 576..596
NoneNo IPR availableGENE3D2.30.30.140coord: 51..110
e-value: 4.4E-5
score: 25.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1470contigH-canaliculatus_F_contig1470:5242..7492 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1470.3591.1mRNA_H-canaliculatus_F_contig1470.3591.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1470 5242..7492 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1470.3591.1 ID=prot_H-canaliculatus_F_contig1470.3591.1|Name=mRNA_H-canaliculatus_F_contig1470.3591.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=602bp
PSTSEAASRRAAATSSRKAAAAMAATRELLEKQSRGLHLEVKRAMRVATT
TLRESDRVESRWRRPTRLDKPRIDPGAWHPGRVVQSHKDGGRVDVVFEDG
DGERLSGIPVKHVRRAPSPLSLKSFLISRSGTEKDAMVSLVEKSNSNDPS
SSTPTPMAVDELSSESRRELAHIACATKSLRSTWEDPVPIDQEMARLRML
GEEKMRCRPEWKGSFPTINFQATKRLPFGAGGMSGARAARAGRAAAVPTA
ARGRRRDRHVVRARSRTPSSRSLAITNGIAVQTNPGSRDCGRGQWDGTCP
AEGETPTTQRKRTTGTTTATTAHRDHIFCTPPLVPASLFNAQSRLVAAAV
AYDRCVAGARDCLDRGAAAFRQARTYSEQQKAFEESTAVVGPSQPARAGY
TDWRGRPVIGLQNATLDVVEAMDTWAAEWRTTRENETGLGEKSSGGMGKE
QVAKDGAVEVVATAAPPFLWEGSPLVSTIVGQSAKLLASTPELGEWYGPG
FPIKRNPFFLAYPLDDRPVTPRNAFVRTWVNGEMVTTVSPILLEGREKEE
KALKGILDKQASAPSWWPSTRGVSGRDIHNERIRQAEKIIAREELQVVKG
RD
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