prot_H-canaliculatus_F_contig14688.3582.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14688.3582.1
Unique Nameprot_H-canaliculatus_F_contig14688.3582.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length92
Homology
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: D7FJC4_ECTSI (DNA repair helicase rad5,16, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC4_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 5.770e-46
Identity = 74/82 (90.24%), Postives = 80/82 (97.56%), Query Frame = 0
Query:    9 PGGGLLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYK 90
            P GGLLGVRW RVILDEAHSIRNT+T+QSRACL+LEADQRWAVTGTPIQNSLDD+AALLAFLRHEPWSDRGWWR+VI+DPYK
Sbjct:  624 PAGGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYK 705          
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: A0A6H5KHD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD4_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 5.780e-45
Identity = 75/84 (89.29%), Postives = 81/84 (96.43%), Query Frame = 0
Query:    8 YPG-GGLLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYK 90
            Y G GGLLGVRW RVILDEAHSIRNT+T+QSRACL+LEADQRWAVTGTPIQNSLDD+AALLAFLRHEPWSDRGWWR+VI+DPYK
Sbjct:  999 YQGVGGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYK 1082          
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: W7T2G0_9STRA (Snf2 family helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T2G0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.470e-32
Identity = 50/79 (63.29%), Postives = 63/79 (79.75%), Query Frame = 0
Query:   12 GLLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYK 90
            GL GVRW RV+LDEAH+I+N  T+  RA   LEA +RWA+TGTPIQN LDDV +LL FLRH+PW D  WWR+VI++P++
Sbjct:   42 GLFGVRWGRVVLDEAHTIKNQGTEAFRAAFALEASRRWALTGTPIQNVLDDVFSLLRFLRHQPWDDPVWWRKVISEPFQ 120          
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: A0A836CF42_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF42_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.330e-31
Identity = 57/86 (66.28%), Postives = 66/86 (76.74%), Query Frame = 0
Query:    1 GDGNGGLYPGGGLLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIA 86
            GDG G      GLLG+RWRRVILDEAH+I+N  T+ +RA   L A+ RWAVTGTPIQNSL+D+ AL+ FLRHEPWSD  WW RVIA
Sbjct: 1043 GDGGGTKARVSGLLGLRWRRVILDEAHTIKNATTETARAAFMLRAESRWAVTGTPIQNSLEDLLALVRFLRHEPWSDPVWWNRVIA 1128          
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: A0A5A8D5B7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D5B7_CAFRO)

HSP 1 Score: 119 bits (299), Expect = 1.840e-29
Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 0
Query:   13 LLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYKV 91
            + G RWRRV+LDEAH+I+NT T  SR+CL +EA  RWA+TGTP+QNSL D+ +L+ F+RH+PW +  WWRRVIA P++ 
Sbjct:  224 VYGARWRRVVLDEAHAIKNTSTDTSRSCLAIEAVHRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEA 302          
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: A0A5A8CW93_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CW93_CAFRO)

HSP 1 Score: 119 bits (299), Expect = 1.850e-29
Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 0
Query:   13 LLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYKV 91
            + G RWRRV+LDEAH+I+NT T  SR+CL +EA  RWA+TGTP+QNSL D+ +L+ F+RH+PW +  WWRRVIA P++ 
Sbjct:   55 VYGARWRRVVLDEAHAIKNTSTDTSRSCLAIEAVHRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEA 133          
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: A0A5A8CAC5_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CAC5_CAFRO)

HSP 1 Score: 119 bits (299), Expect = 1.870e-29
Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 0
Query:   13 LLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYKV 91
            + G RWRRV+LDEAH+I+NT T  SR+CL +EA  RWA+TGTP+QNSL D+ +L+ F+RH+PW +  WWRRVIA P++ 
Sbjct:  258 VYGARWRRVVLDEAHAIKNTSTDTSRSCLAIEAVHRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEA 336          
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: A0A4D9CS79_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS79_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.580e-29
Identity = 51/79 (64.56%), Postives = 63/79 (79.75%), Query Frame = 0
Query:   12 GLLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYK 90
            GL GVRW RV+LDEAH+I+N  T+  RA   LEA +RWA+TGTPIQN LDDV +LL FLRH+PW D  WWR+VIA+P++
Sbjct:  928 GLFGVRWGRVVLDEAHTIKNQGTEAFRAAYALEASRRWALTGTPIQNVLDDVFSLLRFLRHQPWDDPVWWRKVIAEPFQ 1006          
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: A0A8K1CQ45_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ45_PYTOL)

HSP 1 Score: 112 bits (279), Expect = 9.370e-27
Identity = 49/78 (62.82%), Postives = 59/78 (75.64%), Query Frame = 0
Query:   13 LLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYK 90
            LLG  W RVILDEAHSI+N  T   RAC  L+A  RW +TGTPIQNSL D+ +LL FLR+EPWS   WW+RVIA+P++
Sbjct:  558 LLGTEWDRVILDEAHSIKNRATTYFRACAALQAVHRWCLTGTPIQNSLSDLFSLLCFLRYEPWSRVAWWKRVIANPFE 635          
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Match: A0A7J7QN53_9CHLO (SNF2 family N-terminal domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QN53_9CHLO)

HSP 1 Score: 110 bits (276), Expect = 2.370e-26
Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    3 GNGGLYPGGGLLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYK 90
            G+ GL  GGGLLG +W RV+LDEAH+IRN++T+Q++AC  L+A +RWAVTGTP+QN L DV  LL FL  +P  DR +WRR +  P +
Sbjct:  409 GDVGLRGGGGLLGQQWLRVVLDEAHTIRNSETQQAKACRALKAQRRWAVTGTPLQNRLADVYGLLVFLGLKPLDDRAFWRRCVERPLR 496          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14688.3582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJC4_ECTSI5.770e-4690.24DNA repair helicase rad5,16, putative n=1 Tax=Ecto... [more]
A0A6H5KHD4_9PHAE5.780e-4589.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7T2G0_9STRA1.470e-3263.29Snf2 family helicase n=1 Tax=Nannochloropsis gadit... [more]
A0A836CF42_9STRA3.330e-3166.28SNF2 family N-terminal domain-containing protein n... [more]
A0A5A8D5B7_CAFRO1.840e-2959.49Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CW93_CAFRO1.850e-2959.49Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CAC5_CAFRO1.870e-2959.49Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A4D9CS79_9STRA2.580e-2964.56Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8K1CQ45_PYTOL9.370e-2762.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7J7QN53_9CHLO2.370e-2656.82SNF2 family N-terminal domain-containing protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 13..90
e-value: 8.7E-28
score: 97.0
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 10..87
e-value: 6.4E-24
score: 86.1
NoneNo IPR availablePANTHERPTHR45626:SF22DNA REPAIR PROTEIN RAD5coord: 11..89
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 11..89
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14688contigH-canaliculatus_F_contig14688:575..1130 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14688.3582.1mRNA_H-canaliculatus_F_contig14688.3582.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14688 575..1130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14688.3582.1 ID=prot_H-canaliculatus_F_contig14688.3582.1|Name=mRNA_H-canaliculatus_F_contig14688.3582.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=92bp
GDGNGGLYPGGGLLGVRWRRVILDEAHSIRNTDTKQSRACLQLEADQRWA
VTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRRVIADPYKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR038718SNF2-like_sf
IPR000330SNF2_N