prot_H-canaliculatus_F_contig1465.3566.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1465.3566.1
Unique Nameprot_H-canaliculatus_F_contig1465.3566.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length773
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1465.3566.1 vs. uniprot
Match: A0A812I8N5_9DINO (PGR3 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812I8N5_9DINO)

HSP 1 Score: 60.5 bits (145), Expect = 1.240e-5
Identity = 30/82 (36.59%), Postives = 51/82 (62.20%), Query Frame = 0 
Query:  435 FEKAAALFQEMREGGDVARPERRTYNAAITVFGSHLRWESALAVLRGM-EEDGFAPDAFAYRYAVDACRKSEQWEAALGLLR 515
            +++AA L + M    D  +P++ ++NA ++V+GS  +W SAL  ++ M +    +PD   +  AVDAC +S +WEAA  L+R
Sbjct:  481 WQRAAYLLRLMAS--DAVQPDKGSFNALLSVYGSAAKWASALQTVQAMCQAPWVSPDVITWSSAVDACGRSSRWEAASQLMR 560
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1465.3566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A812I8N5_9DINO1.240e-536.59PGR3 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 611..771
e-value: 2.7E-35
score: 124.2
coord: 248..404
e-value: 1.4E-39
score: 138.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 98..247
e-value: 1.5E-28
score: 101.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 520..610
e-value: 5.9E-18
score: 67.4
coord: 431..519
e-value: 2.1E-18
score: 68.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 377..410
e-value: 4.3E-5
score: 21.4
coord: 200..233
e-value: 2.1E-6
score: 25.5
coord: 341..373
e-value: 5.2E-4
score: 18.0
coord: 308..338
e-value: 7.1E-4
score: 17.6
coord: 166..197
e-value: 4.2E-4
score: 18.3
coord: 669..703
e-value: 4.3E-6
score: 24.6
coord: 458..491
e-value: 4.8E-5
score: 21.3
coord: 634..667
e-value: 3.0E-4
score: 18.8
coord: 565..598
e-value: 0.002
score: 16.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 291..350
e-value: 0.0026
score: 17.8
coord: 518..574
e-value: 3.2E-5
score: 23.9
coord: 585..644
e-value: 1.3E-7
score: 31.6
coord: 657..708
e-value: 1.6E-5
score: 24.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 373..420
e-value: 2.6E-9
score: 37.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 716..734
e-value: 1.1
score: 9.6
coord: 458..487
e-value: 0.0055
score: 16.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 490..525
score: 7.87
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 667..701
score: 11.542
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 597..630
score: 6.347
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 304..338
score: 10.457
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 198..232
score: 10.863
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 374..408
score: 11.159
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 526..556
score: 7.881
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 702..736
score: 9.493
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 339..373
score: 10.052
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..197
score: 11.17
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 562..596
score: 10.161
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 631..666
score: 8.418
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 455..489
score: 9.613
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 268..298
score: 6.489
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 128..162
score: 6.982
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 233..267
score: 9.493
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 143..243
e-value: 1.3E-8
score: 34.4
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 111..260
coord: 593..769
coord: 433..606
coord: 251..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1465contigH-canaliculatus_F_contig1465:2265..5722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1465.3566.1mRNA_H-canaliculatus_F_contig1465.3566.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1465 1605..6689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1465.3566.1 ID=prot_H-canaliculatus_F_contig1465.3566.1|Name=mRNA_H-canaliculatus_F_contig1465.3566.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=773bp
MASFSGRAAAKGFLQASLRLSPGAPSFSARTRPFFSARGLGAWSAGGGHG
DDAASVDAGFATVDGEAAVAASAAFVDPESAKKDGGKASGGLSREAPFLR
RMKLAHLRGDDQQAGRLLAEASAQGVVNDRMYELALSVFSSRKRWKKVVA
TFDDLKAAGLKQDLRAYNAAIMACSNCNDADRAAELFREMPAAGLVPEVY
TYTALIFAFGYQGRSEEALTTFEEMRDSGVAADERAYRAAIDACGIGLQW
EKAVQLLREMPTVGITPGDLSYRAAIMACRRGEKWELAVALLREMEDAEG
VCPDHVCYKDAISACCAAQEWELALQLLREMPTAGLTPEPFSYACCIKAC
SRAGHYEISMDILGEMVHAGLRPGLATFNSVLKACSKRRRWKPAVELLRQ
MARVGVTPDVSSYTAVLTACRAHGGKEEGEEDGGFEKAAALFQEMREGGD
VARPERRTYNAAITVFGSHLRWESALAVLRGMEEDGFAPDAFAYRYAVDA
CRKSEQWEAALGLLRESQDREGVCPDVMTFNSVVAACGDGMQFEQSVKLL
LEMRQDPNITPDRRTYNAVLKMCGACLQWKQAMLVLRDMTDVGISPSVAS
YTFAIKATRQEEWGLALELLREMQDEGIAPDRLTYTMVIEALGNGLQWEE
ALGVHREMTARYGIHPTEVTYNAAIEACSRSRRHEEAISSLRGMVEAGIR
PNVMSYNWTFSSLEGRGQGEKALGLLRRMLRDGVVPNEGTREAVRKACEP
HGQEWETARTLLEDSVEHESCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf