prot_H-canaliculatus_F_contig1463.3560.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1463.3560.1
Unique Nameprot_H-canaliculatus_F_contig1463.3560.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length144
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1463.3560.1 vs. uniprot
Match: D8LEY7_ECTSI (C3H1-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY7_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.460e-9
Identity = 37/54 (68.52%), Postives = 38/54 (70.37%), Query Frame = 0 
Query:   91 PCRFYARGLCAKGKACPFFHAPHTAQAPATPTAAVAAENSGRTKTYPAPNTLRG 144
            PCRFYARGLC KGKACPFFHAP   QAPA  TA    E+S R    PAP TLRG
Sbjct:   69 PCRFYARGLCTKGKACPFFHAPSAQQAPAERTAP---ESSRR----PAPTTLRG 115
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BLAST of mRNA_H-canaliculatus_F_contig1463.3560.1 vs. uniprot
Match: A0A6H5L3Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y8_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 8.530e-8
Identity = 32/54 (59.26%), Postives = 35/54 (64.81%), Query Frame = 0 
Query:   91 PCRFYARGLCAKGKACPFFHAPHTAQAPATPTAAVAAENSGRTKTYPAPNTLRG 144
            PCRFYARGLC KG+ACPFFHAP   Q PA  TA  ++         PAP TLRG
Sbjct:  165 PCRFYARGLCTKGRACPFFHAPSAQQVPAERTAPESSWG-------PAPTTLRG 211
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1463.3560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEY7_ECTSI1.460e-968.52C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L3Y8_9PHAE8.530e-859.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.1000.10coord: 79..136
e-value: 1.7E-6
score: 29.8
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 86..113
score: 14.117
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 90..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1463contigH-canaliculatus_F_contig1463:6957..7388 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1463.3560.1mRNA_H-canaliculatus_F_contig1463.3560.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1463 6957..7388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1463.3560.1 ID=prot_H-canaliculatus_F_contig1463.3560.1|Name=mRNA_H-canaliculatus_F_contig1463.3560.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=144bp
GYTCDGRCNLRHPSAAELAALAASPPPTPPATRVPMASRATPSWQQLAVK
QQQQQRAGMAQNSPSSAPAPAPPAATPAAAAAAAAPAAAPPCRFYARGLC
AKGKACPFFHAPHTAQAPATPTAAVAAENSGRTKTYPAPNTLRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR000571Znf_CCCH