prot_H-canaliculatus_F_contig14626.3558.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14626.3558.1
Unique Nameprot_H-canaliculatus_F_contig14626.3558.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length221
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14626.3558.1 vs. uniprot
Match: A0A6H5L7P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P1_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 6.430e-44
Identity = 94/130 (72.31%), Postives = 101/130 (77.69%), Query Frame = 0 
Query:   64 QALKLCTTPAPSQTAATRSLAPLGIREVAPTLGGPVGSLGGLVSRRHLRVTRTPPQTPPMPPMDLRYNYAAGVFIVVLFTWAALTPEDDGFNTLLGXXXXXXXXXXXXXXXXV-RYDGTGYEGRDKALAG 192
            QAL+   TP+   +A T + A       A  + GPVGSLGGLVSRRHLRVT TPPQTPPMPPMDLRYNYAAGVFIVVLFTWAAL+PEDDGFNTLLG       XXXXXXXXX  RYDGTGYEGRDKAL+G
Sbjct:   18 QALRPTVTPSTKISALTPTAA-------ARPIVGPVGSLGGLVSRRHLRVTHTPPQTPPMPPMDLRYNYAAGVFIVVLFTWAALSPEDDGFNTLLGGSGMNKDXXXXXXXXXXERYDGTGYEGRDKALSG 140
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14626.3558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L7P1_9PHAE6.430e-4472.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 148..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14626contigH-canaliculatus_F_contig14626:945..2265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14626.3558.1mRNA_H-canaliculatus_F_contig14626.3558.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14626 368..2349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14626.3558.1 ID=prot_H-canaliculatus_F_contig14626.3558.1|Name=mRNA_H-canaliculatus_F_contig14626.3558.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=221bp
MCRRWGVAFYRSDSITISLRFLEDGFADSQQHKHCRNDEWQISRKCAALN
PAFLLKSRPPHHMQALKLCTTPAPSQTAATRSLAPLGIREVAPTLGGPVG
SLGGLVSRRHLRVTRTPPQTPPMPPMDLRYNYAAGVFIVVLFTWAALTPE
DDGFNTLLGGGGMGDDDDDDDDDDDVRYDGTGYEGRDKALAGSSGGEGGR
SSSNSSSGIAASSNRAAERD*
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