prot_H-canaliculatus_F_contig14615.3554.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14615.3554.1
Unique Nameprot_H-canaliculatus_F_contig14615.3554.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length139
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14615.3554.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 6.170e-38
Identity = 82/101 (81.19%), Postives = 85/101 (84.16%), Query Frame = 0 
Query:   39 LAKLEQKRLEKEAXXXXXAEQHAREQARRGIERERARLAKRYPLPDEELWEEQLQMGKQPAPWPESGELPCPPGFPPSAFGDVVSAWACLQLFGTLMHLKR 139
            LAKLEQKRLEK  XXXXX          RGIE+ERARLAKRYPLPDEEL +EQL MGKQPAPWPE G+LPCP GFPPSAFGDVVSAWACLQLFGTLMHLKR
Sbjct:  921 LAKLEQKRLEKXXXXXXXXXXXXXXXXXRGIEKERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPGKLPCPRGFPPSAFGDVVSAWACLQLFGTLMHLKR 1021
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BLAST of mRNA_H-canaliculatus_F_contig14615.3554.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.580e-37
Identity = 81/100 (81.00%), Postives = 84/100 (84.00%), Query Frame = 0 
Query:   40 AKLEQKRLEKEAXXXXXAEQHAREQARRGIERERARLAKRYPLPDEELWEEQLQMGKQPAPWPESGELPCPPGFPPSAFGDVVSAWACLQLFGTLMHLKR 139
            AKLEQKRLEK  XXXXX          RGIE+ERARLAKRYPLPDEEL +EQL MGKQPAPWPE G+LPCP GFPPSAFGDVVSAWACLQLFGTLMHLKR
Sbjct:  610 AKLEQKRLEKXXXXXXXXXXXXXXXXXRGIEKERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPGQLPCPRGFPPSAFGDVVSAWACLQLFGTLMHLKR 709
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14615.3554.1 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 8.520e-10
Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 0 
Query:   69 IERERARLAKRYPLPDEELWEEQLQMGKQPAPWPESGELPCPPGFPPSAFGDVVSAWACLQLFGTLMHLKR 139
            +E++R    KRYP+PDEELWEE L+  +Q  PWP   E P PP     AFG+++S WA +QLFG L+   +
Sbjct:  765 LEKKRMAALKRYPIPDEELWEE-LKDHEQ-DPWPMPPERPHPPSLSGEAFGELLSTWAFMQLFGELVRAPK 833
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14615.3554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L351_9PHAE6.170e-3881.19DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
D7G6R7_ECTSI1.580e-3781.00Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZDW7_9STRA8.520e-1047.89Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14615contigH-canaliculatus_F_contig14615:234..2224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14615.3554.1mRNA_H-canaliculatus_F_contig14615.3554.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14615 234..2248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14615.3554.1 ID=prot_H-canaliculatus_F_contig14615.3554.1|Name=mRNA_H-canaliculatus_F_contig14615.3554.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=139bp
MLLERQAERQAAQEKKLEKQREMAEEKERVRRAKEMERLAKLEQKRLEKE
AKDRERAEQHAREQARRGIERERARLAKRYPLPDEELWEEQLQMGKQPAP
WPESGELPCPPGFPPSAFGDVVSAWACLQLFGTLMHLKR
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