prot_H-canaliculatus_F_contig1458.3532.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1458.3532.1
Unique Nameprot_H-canaliculatus_F_contig1458.3532.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length285
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1458.3532.1 vs. uniprot
Match: A0A6H5JN11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN11_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.830e-13
Identity = 72/188 (38.30%), Postives = 91/188 (48.40%), Query Frame = 0 
Query:  102 GAGEAPENEEDVCALFATTMPRDVWANPSLAALAALIDEDEEAKQESGEAKQAEKMDDQEPTSS--HYAAPRPYQANTTSDN--EGAGPSL-GAQSSQQNLNIASAKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGRGTGGSSGRNGXRGGATQSQRSGPTPGETQVLMSLWGL 284
            G  E  E +EDVCALFAT+MPRDVWANPSLAALAA+IDED E K++        ++D QE +SS  H  APR   ++ + D   +G  P + GA S+  N N      +                                      RR +G   SSGR+       + + S PT GETQVLMSLW L
Sbjct:    4 GTVEEQEKDEDVCALFATSMPRDVWANPSLAALAAMIDEDAEEKEK--------QVDGQEHSSSNDHQGAPREGSSSISDDGNEDGLAPRIQGAHSTTANQNGVRGGTTPTSGSRHQRREDMRRRRTERRASPYGPAAG--------RRVQGKHISSGRS-----VVRDRGSAPTTGETQVLMSLWRL 170
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1458.3532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JN11_9PHAE2.830e-1338.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1458contigH-canaliculatus_F_contig1458:22547..23745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1458.3532.1mRNA_H-canaliculatus_F_contig1458.3532.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1458 21911..23942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1458.3532.1 ID=prot_H-canaliculatus_F_contig1458.3532.1|Name=mRNA_H-canaliculatus_F_contig1458.3532.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=285bp
MLRGHVMAIGWGNIKSACLWARDERAMLINIEFHLTVSVDPFLYTFGNAS
FTPTIICAIVVLPLTAAEGTRLTMDVQPTSSSRDTSASLAGEKMDEMGDG
RGAGEAPENEEDVCALFATTMPRDVWANPSLAALAALIDEDEEAKQESGE
AKQAEKMDDQEPTSSHYAAPRPYQANTTSDNEGAGPSLGAQSSQQNLNIA
SAKRSSRSSSSSTASSATCHRREETIRRRNERRASPYASAAAARRGRGTG
GSSGRNGGRGGATQSQRSGPTPGETQVLMSLWGL*
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