prot_H-canaliculatus_F_contig1454.3512.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1454.3512.1
Unique Nameprot_H-canaliculatus_F_contig1454.3512.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length249
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1454.3512.1 vs. uniprot
Match: D8LCN1_ECTSI (Breast cancer 2 like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN1_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 5.320e-6
Identity = 80/214 (37.38%), Postives = 99/214 (46.26%), Query Frame = 0 
Query:   37 SYGSRSTADALATVVCRLANQEQRRRDGYSAEQPA-PSAARGNEMAAAIAGCVEAPPDAAELLACCP-SGAKASTRAGAANPLTTL-PTVAK-SEVGADSNERSDAGGGATCANVKSGGTG---SGAPSSTVLPSGDSGGYCGGEALT---AQTFLDDLAAACGRRQVLFLIPRRIVSRFSGCRRSEVGVVEGVEPVDVARSTMDLLEDLAGDG 240
            S G  +  DALA+ +CR+A+  +R+  G        PS  R    AA IAG V A P  A  +A  P +GA AS    +A+  T   PT A+ S +   S+  SD         VK+ G G   S APS                      A   LDDLA+ACGRRQ+ F + R   SR  G    +V VV GV  VDVARS   LL DL G G
Sbjct: 4075 SDGEAAIMDALASALCRVAHPSRRQGLGCCGSAGGGPSVRRNVSPAATIAGDVTALPVVAAGMAESPRTGAAASDVKPSADCSTVAGPTTAEGSGINPGSHGFSD---------VKAAGAGGVTSAAPSVXXXXXXXXXXXXXXXXXXXDGAGAMLDDLASACGRRQLSFSVSR-FFSRVLG---RDVAVVHGVGSVDVARSAEALLNDLGGAG 4275
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1454.3512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCN1_ECTSI5.320e-637.38Breast cancer 2 like n=1 Tax=Ectocarpus siliculosu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1454contigH-canaliculatus_F_contig1454:5545..6291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1454.3512.1mRNA_H-canaliculatus_F_contig1454.3512.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1454 5505..7594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1454.3512.1 ID=prot_H-canaliculatus_F_contig1454.3512.1|Name=mRNA_H-canaliculatus_F_contig1454.3512.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=249bp
MAAGGDSTNGAKSAEADSRDTLAGKEEDYPKPSGAASYGSRSTADALATV
VCRLANQEQRRRDGYSAEQPAPSAARGNEMAAAIAGCVEAPPDAAELLAC
CPSGAKASTRAGAANPLTTLPTVAKSEVGADSNERSDAGGGATCANVKSG
GTGSGAPSSTVLPSGDSGGYCGGEALTAQTFLDDLAAACGRRQVLFLIPR
RIVSRFSGCRRSEVGVVEGVEPVDVARSTMDLLEDLAGDGGVLPLVRC*
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