prot_H-canaliculatus_F_contig1454.3511.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1454.3511.1
Unique Nameprot_H-canaliculatus_F_contig1454.3511.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length185
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1454.3511.1 vs. uniprot
Match: D8LCN1_ECTSI (Breast cancer 2 like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN1_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.760e-7
Identity = 40/94 (42.55%), Postives = 49/94 (52.13%), Query Frame = 0 
Query:   31 DDAVVGFVSSFAVLPAPPSPSLVGGEE-----------RRLCSDRDAVV------GSLWLNIDTGERLISAVLPRSALKQLLGLTLRCGGSGRS 107
            DDAV+GFVSSFAVLP  PS  +  G                    D  +      G LW+ IDTG  L +AVLPR++LK+LL + L  G  GRS
Sbjct: 3814 DDAVIGFVSSFAVLPGVPSSVVAAGTRPAPGGVXXXXXXXXXXXXDTSMPGGVDPGCLWMGIDTGGGLAAAVLPRASLKELLDVALGGGNGGRS 3907
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BLAST of mRNA_H-canaliculatus_F_contig1454.3511.1 vs. uniprot
Match: A0A6H5JH10_9PHAE (BRCA-2_helical domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH10_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 2.710e-6
Identity = 59/163 (36.20%), Postives = 70/163 (42.94%), Query Frame = 0 
Query:   31 DDAVVGFVSSFAVLPAPPSPSLVGGEERRLCSDRDAVVGS-------------------LWLNIDTGERLISAVLPRSALKQLLGLTLRCGGSGRSSTTARETAAKARLEEPRVDEASDEGAPAGRPASSEDAAHGFLARAFAV---LGRDGKGWGEDGAGAG 171
            D+AV+GFVSSFAVLP  PS  +  G       +   V GS                   LW+ IDTG  L +AVLP+++LK LL L L  G  G S   A         EEP        G        SED A  FL RA A    LG D +    +G G G
Sbjct: 4192 DEAVIGFVSSFAVLPGFPSSVVAAGTRP---GNGGVVCGSGGGGGVGDTSMPGGLDPGCLWMGIDTGGGLAAAVLPQASLKDLLDLALGAGNGGLSLRPAARGP-----EEPGTG-----GNAETTGTFSEDIARAFLDRAAAAAASLGHDDEACRREGGGRG 4341
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1454.3511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCN1_ECTSI1.760e-742.55Breast cancer 2 like n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JH10_9PHAE2.710e-636.20BRCA-2_helical domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1454contigH-canaliculatus_F_contig1454:4840..5394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1454.3511.1mRNA_H-canaliculatus_F_contig1454.3511.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1454 4840..5396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1454.3511.1 ID=prot_H-canaliculatus_F_contig1454.3511.1|Name=mRNA_H-canaliculatus_F_contig1454.3511.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=185bp
NGSIASGGPGERKTLGLRAEGRAALRGGFADDAVVGFVSSFAVLPAPPSP
SLVGGEERRLCSDRDAVVGSLWLNIDTGERLISAVLPRSALKQLLGLTLR
CGGSGRSSTTARETAAKARLEEPRVDEASDEGAPAGRPASSEDAAHGFLA
RAFAVLGRDGKGWGEDGAGAGASHDKPESDDASSP
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