prot_H-canaliculatus_F_contig14497.3483.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14497.3483.1
Unique Nameprot_H-canaliculatus_F_contig14497.3483.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length92
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14497.3483.1 vs. uniprot
Match: D7G8R8_ECTSI (CNH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R8_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 7.300e-20
Identity = 51/79 (64.56%), Postives = 58/79 (73.42%), Query Frame = 0 
Query:    5 GAPGEGRRTEGRLAPHDIVSFLKTITPSESGREEAKRSAAVASPGSNDVTDGKA-PAIIPLTSGRALAVGYLQALIDAA 82
            GA  +GRR E  LAPHD+VSFLKTITPSESGR  A+ SAA  +  +    +G+A P  IP TSGRALAVGYLQ LIDAA
Sbjct:  695 GASADGRRAEAGLAPHDVVSFLKTITPSESGRANAETSAAATAAAAQPAKEGQAVPMTIPFTSGRALAVGYLQVLIDAA 773
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BLAST of mRNA_H-canaliculatus_F_contig14497.3483.1 vs. uniprot
Match: A0A6H5L3Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y1_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.180e-18
Identity = 51/79 (64.56%), Postives = 56/79 (70.89%), Query Frame = 0 
Query:    5 GAPGEGRRTEGRLAPHDIVSFLKTITPSESGREEAKRSAAVASPGSNDVTDGKA-PAIIPLTSGRALAVGYLQALIDAA 82
            GA  +GRR E  LAPHD+VSFLKTITPSESGR  A+ SAA          +G+A P  IP TSGRALAVGYLQ LIDAA
Sbjct:  214 GASADGRRAEASLAPHDVVSFLKTITPSESGRANAETSAAXXXXXXXXEKEGQAVPMTIPFTSGRALAVGYLQVLIDAA 292
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14497.3483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8R8_ECTSI7.300e-2064.56CNH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L3Y1_9PHAE1.180e-1864.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14497contigH-canaliculatus_F_contig14497:1624..2261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14497.3483.1mRNA_H-canaliculatus_F_contig14497.3483.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14497 1624..2261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14497.3483.1 ID=prot_H-canaliculatus_F_contig14497.3483.1|Name=mRNA_H-canaliculatus_F_contig14497.3483.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=92bp
GAVAGAPGEGRRTEGRLAPHDIVSFLKTITPSESGREEAKRSAAVASPGS
NDVTDGKAPAIIPLTSGRALAVGYLQALIDAAGSGGGAGGGE
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