prot_H-canaliculatus_F_contig14490.3479.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14490.3479.1
Unique Nameprot_H-canaliculatus_F_contig14490.3479.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length410
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14490.3479.1 vs. uniprot
Match: D7G4A8_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A8_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 4.260e-98
Identity = 271/400 (67.75%), Postives = 291/400 (72.75%), Query Frame = 0 
Query:   24 GGGLTCYDVLAKGVGPVCLLLVVLSGRLRGEPSVAVKPAAAFALAALILEPLFSAYVLESGGPASAXXXXXXXXXXXXXXXXXXXGRGGGLARLLFLS--PKRVLGHIGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVARARWLTAGAQLTLWAAVVLAYARISLRLSRGAPGRTVGGYMTALRTLAAKERGTGGLARIGQCGKGGRGWYGDGGXXXXXXXXXXXXXXXGAGTKPRAYGVLGSLYESLVAAGGWGGR-RVGSAATELSQHQALDDGPPFERGEVTVRNIFCFGLDAAITGRPPSASLNGNTSGXXXXXXXXXXXXXXXXXXX------------SSRPFYVTVSLGGVTAKTSPRQGFSPRFTEVFPLGADCPIRGAFITIAVID 408
            G   TCYDVL KGVGP CLLLVVLS  +R EPSVAVKPAAA ALAAL+LEPLFSAYVL        XXXXXXXXXXXXX          GLARLL L   P RVLG +G     XXXXXXXXXXXXXXXXXXXXXXXXXXXLVARARWLTAGAQL LWAAVVLAYA +SLRLSRG PG+TVGGYM+ALR+LAAK+RGTGG  RI Q G G            XXXXXXXXXXXX      RA G+LGSLYE+L+         R+   A  L QHQ   DGPPFERGEVTVR+I+C GLDA+ITGRPPS   NGN+ G      XXXXXXXXXXXXX            SSRPFYVTVSLGG+TAKTS RQGFSP FTEVFPLG DCPIRGA++TIAV+D
Sbjct:   88 GCEFTCYDVLTKGVGPACLLLVVLSRSIRSEPSVAVKPAAAVALAALLLEPLFSAYVLGXXXXXXXXXXXXXXXXXXXXTRS-------GLARLLLLRDVPHRVLGQVG-----XXXXXXXXXXXXXXXXXXXXXXXXXXXLVARARWLTAGAQLVLWAAVVLAYANVSLRLSRGPPGKTVGGYMSALRSLAAKKRGTGGWVRIDQWGTG------------XXXXXXXXXXXXXXXXXARANGLLGSLYETLMGXXXXXXXGRICPEAMALCQHQKSYDGPPFERGEVTVRSIYCSGLDASITGRPPS---NGNSVGGVGVGGXXXXXXXXXXXXXXXXXXGGLIAGGSSRPFYVTVSLGGLTAKTSARQGFSPTFTEVFPLGCDCPIRGAYLTIAVVD 460
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14490.3479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4A8_ECTSI4.260e-9867.75C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..409
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14490contigH-canaliculatus_F_contig14490:597..2401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14490.3479.1mRNA_H-canaliculatus_F_contig14490.3479.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14490 597..2401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14490.3479.1 ID=prot_H-canaliculatus_F_contig14490.3479.1|Name=mRNA_H-canaliculatus_F_contig14490.3479.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=410bp
GVRTAPLRTLAPPSLRSNLGPASGGGLTCYDVLAKGVGPVCLLLVVLSGR
LRGEPSVAVKPAAAFALAALILEPLFSAYVLESGGPASATTAAASAAAAA
AAAATATTGRGGGLARLLFLSPKRVLGHIGGGGGRGKTDAAASAAAAAAA
AAAAAASASASALVARARWLTAGAQLTLWAAVVLAYARISLRLSRGAPGR
TVGGYMTALRTLAAKERGTGGLARIGQCGKGGRGWYGDGGGGVGGRDDGA
GGVGGGAGTKPRAYGVLGSLYESLVAAGGWGGRRVGSAATELSQHQALDD
GPPFERGEVTVRNIFCFGLDAAITGRPPSASLNGNTSGGGGFVGGADGGG
GGLIAGGSSRPFYVTVSLGGVTAKTSPRQGFSPRFTEVFPLGADCPIRGA
FITIAVIDR*
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