prot_H-canaliculatus_F_contig1449.3475.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1449.3475.1
Unique Nameprot_H-canaliculatus_F_contig1449.3475.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length522
Homology
BLAST of mRNA_H-canaliculatus_F_contig1449.3475.1 vs. uniprot
Match: A0A6H5KQJ6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ6_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.970e-23
Identity = 117/345 (33.91%), Postives = 156/345 (45.22%), Query Frame = 0
Query:    2 LRRTKGQERVEKSLRVWHTLLAKTSGQ-VQDMILSTGSPQQGWRAFVSQHRENFDREGERLEREWNELRQGDDEDVMDYLRRGQTLQMNMNSRLGPSGHGRKSEDVVCRHIARRLNSSFARAREYLLFYHGLSRKHLEFTISQAQHEHRQSGREGDGREETRHALYTSGMGRGATSHGRGQDDGGGRNAGWXXXXXXXXXXXXXXXXXXXXXXXDRNPNQEAPM-FCRRHGQNDTHNTENCVALRREF----EEFLDFREQTGDHRFAYEGRKTGRDIDGFV------RRPDFMQGRP-REQPFPQRSDGNWGRGLPPRQAPGRGRGPAS-----FTGRYPGGRG 328
            LR T G+ERV++  ++W  +LAK + Q VQ  IL+  SPQ G+R F+ Q+ ++  +E + L+  WN + Q   E +MDY  R   L M    RL   G  R  E  +CRHI R     F + ++ LLF   LSR  ++  +   +HE R   R+G+ +EE RHAL  +G+GRG    G G+    G   G                            NQ+ P  FC+ HG N TH T  C  LR EF     EF            AY   +  R+  GFV      +    M G P R+QP+       W RG  P   PG  RGP S       GR  GGRG
Sbjct:   18 LRSTYGEERVKQPRKIWTFMLAKITAQPVQAQILAAESPQAGYRVFIDQYSQDKSQERQNLDDAWNVIGQRQGESLMDYYGRAVALWM----RLRSYGDYR-DEKSMCRHIVRGFLPRFEKTKDRLLFDTMLSRATMQEMLRMEEHELRYERRDGERKEEMRHALVAAGVGRGG---GAGKPAAAGSEQGGHRPQQPQGSLPL------------HQQNQQQPSHFCQLHGPNSTHETSECEKLRNEFIAHYNEFC-----------AYMSGR--REAQGFVFPRGGAQHSGRMVGGPSRQQPYQNEQGAGWSRGHSP-ALPGPPRGPGSGAGGQLQGRNSGGRG 328          
BLAST of mRNA_H-canaliculatus_F_contig1449.3475.1 vs. uniprot
Match: A0A6H5L9J1_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9J1_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 9.040e-19
Identity = 67/173 (38.73%), Postives = 99/173 (57.23%), Query Frame = 0
Query:    2 LRRTKGQERVEKSLRVWHTLLAKTSGQ-VQDMILSTGSPQQGWRAFVSQHRENFDREGERLEREWNELRQGDDEDVMDYLRRGQTLQMNMNSRLGPSGHGRKSEDVVCRHIARRLNSSFARAREYLLFYHGLSRKHLEFTISQAQHEHRQSGREGDGREETRHALYTSGMGRG 173
            LR T G+ERV++S ++W  +LAK + Q  Q  IL++ SPQ G+R F+ Q+ ++  +E + L+  WN + Q   E +MDY  R   L M    RL   G  R  E  +CRHI R     F + ++ LLF   LSR  ++  +   +HE R   R+G+ +EE RHAL  +G+GRG
Sbjct:  116 LRSTYGEERVKQSRKIWTFMLAKITAQPAQAQILASESPQAGYRVFLEQYSQDKSQERQTLDDAWNVIGQRQGESLMDYYGRAVALWM----RLRSYGDNR-DEKSMCRHIVRGFLPRFEKTKDRLLFDTMLSRATMQEMLRMEEHELRYERRDGERKEEMRHALVAAGVGRG 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1449.3475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQJ6_9PHAE1.970e-2333.91Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L9J1_9PHAE9.040e-1938.73Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1449contigH-canaliculatus_F_contig1449:20340..21905 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1449.3475.1mRNA_H-canaliculatus_F_contig1449.3475.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1449 20340..21905 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1449.3475.1 ID=prot_H-canaliculatus_F_contig1449.3475.1|Name=mRNA_H-canaliculatus_F_contig1449.3475.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=522bp
MLRRTKGQERVEKSLRVWHTLLAKTSGQVQDMILSTGSPQQGWRAFVSQH
RENFDREGERLEREWNELRQGDDEDVMDYLRRGQTLQMNMNSRLGPSGHG
RKSEDVVCRHIARRLNSSFARAREYLLFYHGLSRKHLEFTISQAQHEHRQ
SGREGDGREETRHALYTSGMGRGATSHGRGQDDGGGRNAGWSDGGARAAG
WSGGGARAAGRSGGDRNPNQEAPMFCRRHGQNDTHNTENCVALRREFEEF
LDFREQTGDHRFAYEGRKTGRDIDGFVRRPDFMQGRPREQPFPQRSDGNW
GRGLPPRQAPGRGRGPASFTGRYPGGRGFADGRPSSSGGRGAGRGGNFRS
NYPPRSAATNGPPRYANYAGPNDGYGYDAYEGDRWGTSNWQYDEEQQYYP
ETYGHGLAAQEGDFREGYGGETGGYGPGYFSAGGEVFPPEPAGHGDGTNG
AYAGYSPAGPDAFQPMRYQEANGAPQQQQQPQYGVQQSASAASSSLSSSS
PSSGSSSSQGPLRSCVALNVSR
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