prot_H-canaliculatus_F_contig14463.3465.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14463.3465.1
Unique Nameprot_H-canaliculatus_F_contig14463.3465.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length102
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14463.3465.1 vs. uniprot
Match: A0A6H5JHX4_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX4_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 5.790e-15
Identity = 41/49 (83.67%), Postives = 42/49 (85.71%), Query Frame = 0 
Query:    7 RLSSADVVLCSLERLAEVPGGASADVRLARSVRWSQVILDVRGVSTPVA 55
            R SS DVVLCSLERLAEV GG SAD RLARSVRWSQV+LDVRGVST  A
Sbjct:  732 RRSSVDVVLCSLERLAEVDGGVSADARLARSVRWSQVVLDVRGVSTAAA 780
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14463.3465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHX4_9PHAE5.790e-1583.67SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14463contigH-canaliculatus_F_contig14463:456..1075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14463.3465.1mRNA_H-canaliculatus_F_contig14463.3465.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14463 456..1077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14463.3465.1 ID=prot_H-canaliculatus_F_contig14463.3465.1|Name=mRNA_H-canaliculatus_F_contig14463.3465.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=102bp
MPSSPTRLSSADVVLCSLERLAEVPGGASADVRLARSVRWSQVILDVRGV
STPVAASAPPAGSGAAAASSGSGGGGSDETGGGGGGGGDCCCPINWPLLS
SV
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