prot_H-canaliculatus_F_contig14461.3464.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14461.3464.1
Unique Nameprot_H-canaliculatus_F_contig14461.3464.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length168
Homology
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: D7FM83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM83_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 1.110e-59
Identity = 110/164 (67.07%), Postives = 118/164 (71.95%), Query Frame = 0
Query:    2 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSIQ 165
            GGKIINQ+QT+T TRVKLSQKNEFFPGT DRVALVQGE P +VAEAV +MLRRL EAARP PQAP  GG +     H                           G +AQV +RLLVPLAAGGLIIGRGGETIK IG+RTGARVILAGKDADV GVPSERLCSIQ
Sbjct:  140 GGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHE---------------GYGSGGLDGPHGRDAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQ 288          
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A6H5KV61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV61_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.550e-55
Identity = 111/167 (66.47%), Postives = 120/167 (71.86%), Query Frame = 0
Query:    2 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSIQVRL 168
            GGKIINQ+QT+T TRVKLSQKNEFFPGT DRVALVQGE P +VAEAV +MLRRL EAARP PQAP  GG +     H                           G +AQV++RLLVPLAAGGLIIGRGGETIK IG+RTGARVILAGKDADV GVPSERLCSIQ  L
Sbjct:  210 GGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHDGYGSGGLDEPY---------------GRDAQVMIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADL 361          
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A7S0VZV1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VZV1_9CRYP)

HSP 1 Score: 74.3 bits (181), Expect = 4.860e-13
Identity = 55/162 (33.95%), Postives = 80/162 (49.38%), Query Frame = 0
Query:    3 GKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSI 164
            G  I +LQ+ T  R+++S+  EFFPGT +RV L+ G+      +AV   LR +        Q  +G   +  G+ H                            L     + L+VP AA G+IIGRGGE ++ I  +TG+RV LAGK+  +PG+P ERL S+
Sbjct:   46 GATIMELQSLTGCRMRVSKAEEFFPGTGERVVLMTGQ-----YDAVERCLRTV------ISQMYKGFSDLNSGVPH------------------PSLDAKPLQDLQGLKTITLVVPTAASGVIIGRGGENVRGIALKTGSRVQLAGKETLIPGLP-ERLLSV 177          
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A7S1BNP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNP4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 9.530e-13
Identity = 53/163 (32.52%), Postives = 77/163 (47.24%), Query Frame = 0
Query:    3 GKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQ-APQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSI 164
            G+ I+ LQ  +  R+KLSQ  + FPGT +RV L+QGE    V EAV  +L ++ +A     + A  G  S  V                                 ++  ++++LVP  A G++IGRGG  IK I   +GAR+ LA KD       SER+ +I
Sbjct:  172 GQSISDLQARSGCRIKLSQSGDTFPGTGERVCLIQGEGVNAVREAVALVLAKVRDAKEGQGEFAEDGTDSADVSSRQQRTR-------------------------SSTYVIKVLVPSPACGMLIGRGGSNIKSISESSGARIQLASKDEAASVATSERVVTI 309          
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A7R9WB75_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WB75_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.180e-10
Identity = 60/177 (33.90%), Postives = 85/177 (48.02%), Query Frame = 0
Query:    3 GKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARP-----NPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXAD-GLNAQVL-------VRLLVPLAAGGLIIGRGGETIKDIGSRTGARVI-LAGKDAD-VPGVPSERLCSI 164
            G+ I++LQ  ++ R+KLSQ  + FPGT DRV LVQG     V  A+G +LR+L E  RP       Q  QG  +      H +                        + G++A VL       VRLLVP  + G+IIGRGG  +K +   +G   I L+ K+ + V    SER+ +I
Sbjct:  237 GQTISELQARSSARIKLSQAGDCFPGTSDRVCLVQG-GLDGVKSAIGLVLRKLHELQRPPLTGIQQQTVQGPMATEEAQLHQMGGVLPGLVQSNSHPHLSSVGGSINERGVSAPVLSPSFAFVVRLLVPTPSCGMIIGRGGSNVKSMAETSGVTSIRLSPKENEAVLAATSERVVTI 412          
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: W7TUC6_9STRA (Neuro-oncological ventral antigen 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUC6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.550e-10
Identity = 78/212 (36.79%), Postives = 93/212 (43.87%), Query Frame = 0
Query:    2 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGE-------------------DPKMVAEAVGDMLRRLGEAARPNP-------------QAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLN-----------------AQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSI 164
            GG  IN LQ  T  R+KLSQ  ++FPGTQDRV L+ GE                   + +  A AV  +  R GE                     P  GG          XXXXXXXXXXXXXXXXX      +DG                   A   V+LL+  AAGGL+IGR G TIK +   TG R+ LA KD     V  ER+ +I
Sbjct:  154 GGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAETCVTATLRVIKHLHASAEARSAAAAVRAVSLRAGEEGGVEDVSSKEAYREAGTRDGPGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXTSADSFSDGDESNSHGPRSEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTI 365          
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A4D9CUW7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUW7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 9.310e-10
Identity = 77/212 (36.32%), Postives = 93/212 (43.87%), Query Frame = 0
Query:    3 GKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGE-------------------DPKMVAEAVGDMLRRLGE----------------AARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQ---------------VLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDADVPGVPSERLCSI 164
            G  IN LQ  T  R+KLSQ  ++FPGTQDRV L+ GE                   + +  A AV  +  R GE                 AR  P A  G G  V       XXXXXXXXXXXXXXX         D  N+                  V+LL+  AAGGL+IGR G TIK +   TG R+ LA KD     +  ER+ +I
Sbjct:  155 GATINVLQEKTGARIKLSQNQDYFPGTQDRVVLISGEAETCVTATLRVIKHLHASAEARSAAAAVRAVSLRAGEEGSVEDVSSIEVYREAGARDGPGAG-GSGRPVPAKEVXXXXXXXXXXXXXXXXXTSADSFSDGDESNSHGPRSEAPVEGVGRGSASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMITGERVVTI 365          
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: K7FF08_PELSI (Uncharacterized protein n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FF08_PELSI)

HSP 1 Score: 62.4 bits (150), Expect = 4.320e-9
Identity = 49/150 (32.67%), Postives = 70/150 (46.67%), Query Frame = 0
Query:    2 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDA 151
            GG+ I QLQ  T   +KLS+  +F+PGT +RV LVQG      AEA+  +   + E  R  PQ      S+V     ++                            A+   +L+VP +  GLIIG+GG T+K I  ++GA V L+ K A
Sbjct:   27 GGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-----TAEALNAVHNFIAEKVREIPQ------SVVKPESVNILQPQTTMNPD-----------------RAKQAKKLIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPA 148          
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: A0A3Q0HDQ6_ALLSI (RNA-binding protein Nova-2 n=2 Tax=Amniota TaxID=32524 RepID=A0A3Q0HDQ6_ALLSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.340e-8
Identity = 47/148 (31.76%), Postives = 67/148 (45.27%), Query Frame = 0
Query:    2 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGK 149
            GG+ I QLQ  T   +KLS+  +F+PGT +RV LVQG      AEA+G +   + E  R  PQA      + +                                 +     +L+VP +  GLIIG+GG T+K I  ++GA V L+ K
Sbjct:   25 GGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG-----TAEALGAVHSFIAEKVREIPQAVAKPDPVGI------------------------LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK 143          
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Match: F7ACQ0_XENTR (Neuro-oncological ventral antigen 2 n=7 Tax=Xenopus TaxID=8353 RepID=F7ACQ0_XENTR)

HSP 1 Score: 63.2 bits (152), Expect = 1.400e-8
Identity = 49/152 (32.24%), Postives = 71/152 (46.71%), Query Frame = 0
Query:    2 GGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGDMLRRLGEAARPNPQAPQGGGSMVVGMGHHLXXXXXXXXXXXXXXXXXXXXXXXADGLNAQVL--VRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKDA 151
            GG+ I QLQ  T   +KLS+  +F+PGT +RV LVQG      AE++  +   + E  R   + PQGG    +G+                              +NA+     +L+VP    GLIIG+GG T++ I   +GA V L+ K A
Sbjct:   73 GGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGS-----AESLLSVHNFIAEKVR---EVPQGGTKNDLGV-----------------------LLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQKPA 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14461.3464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM83_ECTSI1.110e-5967.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KV61_9PHAE1.550e-5566.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0VZV1_9CRYP4.860e-1333.95Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S1BNP4_9STRA9.530e-1332.52Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7R9WB75_9STRA1.180e-1033.90Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
W7TUC6_9STRA1.550e-1036.79Neuro-oncological ventral antigen 2 n=1 Tax=Nannoc... [more]
A0A4D9CUW7_9STRA9.310e-1036.32Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K7FF08_PELSI4.320e-932.67Uncharacterized protein n=1 Tax=Pelodiscus sinensi... [more]
A0A3Q0HDQ6_ALLSI1.340e-831.76RNA-binding protein Nova-2 n=2 Tax=Amniota TaxID=3... [more]
F7ACQ0_XENTR1.400e-832.24Neuro-oncological ventral antigen 2 n=7 Tax=Xenopu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 114..164
e-value: 6.5E-7
score: 29.1
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 107..168
e-value: 3.2E-12
score: 48.0
coord: 1..59
e-value: 6.4E-9
score: 37.5
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 101..150
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 1..59
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 2..164
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 110..144
score: 11.531
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 1..51
score: 9.54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14461contigH-canaliculatus_F_contig14461:207..2564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14461.3464.1mRNA_H-canaliculatus_F_contig14461.3464.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14461 207..2564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14461.3464.1 ID=prot_H-canaliculatus_F_contig14461.3464.1|Name=mRNA_H-canaliculatus_F_contig14461.3464.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=168bp
QGGKIINQLQTSTATRVKLSQKNEFFPGTQDRVALVQGEDPKMVAEAVGD
MLRRLGEAARPNPQAPQGGGSMVVGMGHHLHHHHHPYPSGHEGYGFGGGG
GGGADGLNAQVLVRLLVPLAAGGLIIGRGGETIKDIGSRTGARVILAGKD
ADVPGVPSERLCSIQVRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1