prot_H-canaliculatus_F_contig14417.3448.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14417.3448.1
Unique Nameprot_H-canaliculatus_F_contig14417.3448.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length113
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14417.3448.1 vs. uniprot
Match: D7G5I9_ECTSI (Zeaxanthin epoxidase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I9_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 2.570e-44
Identity = 73/93 (78.49%), Postives = 86/93 (92.47%), Query Frame = 0 
Query:   20 PPQMTMAPFKVDAPGGINSVMTSLMKPVLPVIFFMQFMYLYSFHPVALKEGECEELTSKERARAKIQVNECWDAAKEDGTFGRGYERSQKQFS 112
            P ++T++PF +DAPGGINS MTS+MKPVLP+IFF QFMYLYSFHPV+LKEGEC ELT+KERARA+IQV ECW+AAK+DGTF RGYER+QKQFS
Sbjct:  474 PMKVTLSPFNMDAPGGINSFMTSVMKPVLPLIFFAQFMYLYSFHPVSLKEGECAELTNKERARARIQVEECWEAAKKDGTFARGYERAQKQFS 566
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BLAST of mRNA_H-canaliculatus_F_contig14417.3448.1 vs. uniprot
Match: A0A835YX74_9STRA (Zeaxanthin epoxidase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX74_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.470e-26
Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 0 
Query:   20 PPQMTMAPFKVDAPGGINSVMTSLMKPVLPVIFFMQFMYLYSFHPVALKEGECEELTSKERARAKIQVNECWDAAKEDGTFGRGYERSQKQFS 112
            P +MTM+PFK+D PGG+ S+MTSLM+PVLP+IF+ QF YLYSF P +L E E   L ++ERARA+      W  AK DGTF +GY R  KQF+
Sbjct:  457 PARMTMSPFKMDMPGGMKSIMTSLMQPVLPLIFWAQFNYLYSFCPTSLTEEERAALVTEERARARKDAELVWAKAKADGTFAKGYNRELKQFT 549
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BLAST of mRNA_H-canaliculatus_F_contig14417.3448.1 vs. uniprot
Match: A0A7S4CI63_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CI63_9EUGL)

HSP 1 Score: 53.1 bits (126), Expect = 7.510e-6
Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:   33 PGGINSVMTSLMKPVLPVIFFMQFMYLYSFHPVALKEGECEELTSKERARAKIQVNECW 91
            P   +S  T+L++PVLP+IF +QF YLYS+HP  + EG    L     AR K +  E W
Sbjct:  209 PLTYSSFCTTLLRPVLPIIFLLQFGYLYSYHPATM-EGAMPRLVRNLAARHKKEAEEAW 266
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14417.3448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5I9_ECTSI2.570e-4478.49Zeaxanthin epoxidase, chloroplast n=1 Tax=Ectocarp... [more]
A0A835YX74_9STRA5.470e-2656.99Zeaxanthin epoxidase chloroplast n=1 Tax=Tribonema... [more]
A0A7S4CI63_9EUGL7.510e-644.07Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14417contigH-canaliculatus_F_contig14417:1496..2488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14417.3448.1mRNA_H-canaliculatus_F_contig14417.3448.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14417 948..2602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14417.3448.1 ID=prot_H-canaliculatus_F_contig14417.3448.1|Name=mRNA_H-canaliculatus_F_contig14417.3448.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=113bp
MLLASSFPFVRSISSCLVLPPQMTMAPFKVDAPGGINSVMTSLMKPVLPV
IFFMQFMYLYSFHPVALKEGECEELTSKERARAKIQVNECWDAAKEDGTF
GRGYERSQKQFS*
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