prot_H-canaliculatus_F_contig1438.3427.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1438.3427.1
Unique Name	prot_H-canaliculatus_F_contig1438.3427.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	336

Homology

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: D7FHZ0_ECTSI (Phosphorylated adapter RNA export protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ0_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 2.800e-73
Identity = 151/230 (65.65%), Postives = 172/230 (74.78%), Query Frame = 0

Query:   59 AEGGREWGALEDGELLGMIERPLKASRGRPQQQQERQQREFDRDNGRNGRGXGGRNXXXXXXXXXXRPKNNGRAQGRNVTIKECAEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHMEPAKLKELYADEIRVKKEKERARRSEXXXXXXXXXXGDDVMTPRDXXXXXXXXXXXXXGAATRAGRDMGTWASPSDGFG 288
            A GG    A+EDGEL+ MI++PL+ SRGR Q+          RD+GR G   G   XXXXX     RPK +G+A+GRNVTIKECAEW+CERLGE KYYLMC+VVSTIGYNKTR LLE VQ TQE GGMPTADGSRKRTAGGVFFTLLK+HMEP++LKELYADE+RVKKEK+RARR+           G+DVMTPR+     XXXXXXXX  ATRAGRDMG WA P+ G G
Sbjct:  132 AAGGGRGTAVEDGELVQMIDQPLRTSRGREQRSA--------RDSGRGG---GXXXXXXXXRGKRGRPKKDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEPSRLKELYADELRVKKEKDRARRAANKRKAEAALAGEDVMTPRNPPRNRXXXXXXXX-XATRAGRDMGKWAGPTAGAG 349

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A9TJL2_PHYPA (Phosphorylated adapter RNA export protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TJL2_PHYPA)

HSP 1 Score: 68.6 bits (166), Expect = 3.110e-9
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 0

Query:  135 RNVTIKECAEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHMEPAKLKELYADEIRVKKEKERARRSE 235
            + V I+      C R+ ETKY L    V  IG    + LL  V A Q+ GG  TADG R+R+AGGV + LL+ H+ P   KE+  +  R   E+++A++ E
Sbjct:  113 KTVIIERFVVQTCRRIEETKYPLFREAVDRIGIEAMKGLLNQVDAIQKCGGQMTADGLRRRSAGGVLWNLLRDHVGPVLYKEIMKEGNRKHIEQQKAKQKE 213

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: UPI001069D661 (uncharacterized protein LOC114518314 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069D661)

HSP 1 Score: 63.9 bits (154), Expect = 8.510e-8
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 0

Query:  146 MCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQ--HMEPAKLKELYADEIRVKKE 227
            + ERL E K+ L+   V  IG  K   L +  +  Q +GGM T +GSR+RT+GGVFFTLLK   +    ++KE++ +++ +KKE
Sbjct:  146 IAERLEEHKFALIIETVKVIGGKKVLELFKETKRIQLSGGMKTCNGSRRRTSGGVFFTLLKSSNYATDEQIKEIFKEDLTMKKE 229

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A8J2X059_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X059_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.030e-7
Identity = 42/105 (40.00%), Postives = 51/105 (48.57%), Query Frame = 0

Query:  150 LGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHMEPAKLKELY-ADEIRVKKEKERARRSEXXXXXXXXXXGDDVMTPR 253
            L E    L+   +  IG    + LL+ V  TQ  GG+ TADGSRKRT GGVFF LL+  M P   K+L  AD  R K+E E  R+            G D    R
Sbjct:   95 LDEQNIRLLREAIIAIGAKAAKRLLKRVVETQRDGGLATADGSRKRTPGGVFFHLLRDEMTPEAYKQLMKADSKRKKRELEERRKQREKRAREGGTPGGDAKRGR 199

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: Q017X4_OSTTA (Phosphorylated adapter RNA export protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q017X4_OSTTA)

HSP 1 Score: 63.2 bits (152), Expect = 1.190e-7
Identity = 34/100 (34.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query:  135 RNVTIKECAEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHMEPAKLKELYADEIRVKKEKERARRS 234
            R       A  + + L E K  L+ R +  +G +  RA  E   ATQ  GG  TA+G RKRT GG+F+++++  ++     E++A+E   +KE+ +ARR+
Sbjct:   94 RGADASRSARELAQALDEPKVRLLARAIDALGESTCRAYAEEAVATQRNGGELTANGERKRTTGGIFWSIVRARVDKETYDEIFAEERERQKERVKARRA 193

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A0N8CKZ4_9CRUS (Phosphorylated adapter RNA export protein n=5 Tax=Daphnia magna TaxID=35525 RepID=A0A0N8CKZ4_9CRUS)

HSP 1 Score: 63.5 bits (153), Expect = 1.450e-7
Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 0

Query:  138 TIKECAEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHME--PAKLKELYADEIRVKKEKERARRS 234
            T+ E A+ +  +L E K  L+ RVV  IG   T  L    Q T+  GG+  ADGSR+RT GGVF  LL+ H E    K++E+++ E + K++ +R  R+
Sbjct:  225 TVLEVAQDITVKLHEEKMDLILRVVEIIGKELTIQLFRETQETENDGGIMVADGSRRRTPGGVFLYLLRNHEEIPMEKIREVFSQETKAKEQHKRTIRA 323

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A293N1Q8_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293N1Q8_ORNER)

HSP 1 Score: 62.4 bits (150), Expect = 1.740e-7
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0

Query:  143 AEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLK 206
            A+ + ERL E K +L+ RVV  +G  + R LL   +  + AGG+ T DGSR+RTAGGVFF LLK
Sbjct:  131 AQEIAERLQEPKKHLLERVVRILGEARARQLLSMTEDVESAGGLLTIDGSRRRTAGGVFFHLLK 194

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A293M5C7_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293M5C7_ORNER)

HSP 1 Score: 62.4 bits (150), Expect = 3.040e-7
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0

Query:  143 AEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLK 206
            A+ + ERL E K +L+ RVV  +G  + R LL   +  + AGG+ T DGSR+RTAGGVFF LLK
Sbjct:  220 AQEIAERLQEPKKHLLERVVRILGEARARQLLSMTEDVESAGGLLTIDGSRRRTAGGVFFHLLK 283

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A7D9EF16_PARCT (Phosphorylated adapter RNA export protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EF16_PARCT)

HSP 1 Score: 62.0 bits (149), Expect = 3.360e-7
Identity = 35/84 (41.67%), Postives = 50/84 (59.52%), Query Frame = 0

Query:  146 MCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQ--HMEPAKLKELYADEIRVKKE 227
            + ERL E K+ L+   V  IG  K   L    +  Q  GGM T +GSR+RT+GGVF TLLK   +    ++KE++ D++ +KKE
Sbjct:  166 IAERLEEHKFSLIIETVKIIGGKKALDLFNETKQVQLNGGMKTCNGSRRRTSGGVFLTLLKSSNYATDEQIKEIFKDDLSIKKE 249

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: E9GGD8_DAPPU (Phosphorylated adapter RNA export protein n=3 Tax=Daphnia TaxID=6668 RepID=E9GGD8_DAPPU)

HSP 1 Score: 62.4 bits (150), Expect = 3.550e-7
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0

Query:  138 TIKECAEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHME--PAKLKELYADEIRVKKEKERARRS 234
            T+ E A+ +  +L E K  L+ RVV  +G   T  L    Q T+  GG+  ADGSR+RT GGVF  LL+ H E    K++E++++E + +++ +R  R+
Sbjct:  228 TVMEVAQDIALKLHEEKMDLILRVVEILGKEITIKLFYETQETENDGGIMVADGSRRRTPGGVFLYLLRNHEEIPMEKIREIFSEETKAREQHKRTLRA 326

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHZ0_ECTSI	2.800e-73	65.65	Phosphorylated adapter RNA export protein n=2 Tax=...	[more]
A9TJL2_PHYPA	3.110e-9	38.61	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
UPI001069D661	8.510e-8	41.67	uncharacterized protein LOC114518314 n=1 Tax=Dendr...	[more]
A0A8J2X059_9STRA	1.030e-7	40.00	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
Q017X4_OSTTA	1.190e-7	34.00	Phosphorylated adapter RNA export protein n=2 Tax=...	[more]
A0A0N8CKZ4_9CRUS	1.450e-7	39.39	Phosphorylated adapter RNA export protein n=5 Tax=...	[more]
A0A293N1Q8_ORNER	1.740e-7	51.56	Phosphorylated adapter RNA export protein (Fragmen...	[more]
A0A293M5C7_ORNER	3.040e-7	51.56	Phosphorylated adapter RNA export protein (Fragmen...	[more]
A0A7D9EF16_PARCT	3.360e-7	41.67	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
E9GGD8_DAPPU	3.550e-7	37.37	Phosphorylated adapter RNA export protein n=3 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 224..244
IPR019385	Phosphorylated adapter RNA export protein, RNA-binding domain	PFAM	PF10258	RNA_GG_bind	coord: 143..221 e-value: 7.3E-23 score: 80.4
IPR038092	Phosphorylated adapter RNA export protein, RNA-binding domain superfamily	GENE3D	1.10.10.1440		coord: 135..235 e-value: 4.1E-23 score: 83.3
IPR039047	Phosphorylated adapter RNA export protein	PANTHER	PTHR13135	CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26	coord: 83..242

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1438	contig	H-canaliculatus_F_contig1438:9021..10635 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1438.3427.1	mRNA_H-canaliculatus_F_contig1438.3427.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1438 6484..12248 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1438.3427.1 ID=prot_H-canaliculatus_F_contig1438.3427.1|Name=mRNA_H-canaliculatus_F_contig1438.3427.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=336bp
MASIAPPRSPSASKSAPTAAAAAANVEDWGAASQPASAENEPRGKASARP
GAHEAGQFAEGGREWGALEDGELLGMIERPLKASRGRPQQQQERQQREFD
RDNGRNGRGGGGRNGGGGTRGKGGRPKNNGRAQGRNVTIKECAEWMCERL
GETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGV
FFTLLKQHMEPAKLKELYADEIRVKKEKERARRSENKRKAAAALAGDDVM
TPRDPPRSRRRGGDNDDGAATRAGRDMGTWASPSDGFGIGDVGGGGGGGG
GDGGGTTIDAKRVLANARFSDDGQGRGASGTLLPS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039047	PHAX
IPR038092	PHAX_RNA-binding_sf
IPR019385	PHAX_RNA-binding_domain