prot_H-canaliculatus_F_contig14355.3410.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14355.3410.1
Unique Nameprot_H-canaliculatus_F_contig14355.3410.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length83
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14355.3410.1 vs. uniprot
Match: A0A6H5JV62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV62_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 4.480e-19
Identity = 48/59 (81.36%), Postives = 49/59 (83.05%), Query Frame = 0 
Query:    1 VLPLPATREDITRDGRVGRRENAFLDTYFAFFGRFVRLETESEARRTLIELALQDATIT 59
            VLPLPATRE+ITRDGRVGRRENAFLDTYFAFFGRFVR        RTL ELALQDAT T
Sbjct:  560 VLPLPATREEITRDGRVGRRENAFLDTYFAFFGRFVRWVFLF--LRTLTELALQDATTT 616
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BLAST of mRNA_H-canaliculatus_F_contig14355.3410.1 vs. uniprot
Match: D7FM09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM09_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 2.010e-15
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 0 
Query:    1 VLPLPATREDITRDGRVGRRENAFLDTYFAFFGRFVRL-ETESEAR 45
            VLPLPATRE+ITRDGRVGRRENAFLDTYFAFFGRFVR  + + +AR
Sbjct:  532 VLPLPATREEITRDGRVGRRENAFLDTYFAFFGRFVRAGDPDGQAR 577
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14355.3410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV62_9PHAE4.480e-1981.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM09_ECTSI2.010e-1582.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14355contigH-canaliculatus_F_contig14355:666..1469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14355.3410.1mRNA_H-canaliculatus_F_contig14355.3410.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14355 666..1469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14355.3410.1 ID=prot_H-canaliculatus_F_contig14355.3410.1|Name=mRNA_H-canaliculatus_F_contig14355.3410.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=83bp
VLPLPATREDITRDGRVGRRENAFLDTYFAFFGRFVRLETESEARRTLIE
LALQDATITTTTSAAAGGGDSGGDGDVDDPPHR
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