prot_H-canaliculatus_F_contig1432.3383.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1432.3383.1
Unique Nameprot_H-canaliculatus_F_contig1432.3383.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length201
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1432.3383.1 vs. uniprot
Match: A0A6H5K749_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K749_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 2.190e-28
Identity = 100/198 (50.51%), Postives = 109/198 (55.05%), Query Frame = 0 
Query:    4 RRKPRILWTRAAALVLGLARGCLSGAVPPSVPPGWSVHFQEDTPYFHNEKTGETTWEQPRLAATTSVAAAVQAHGQ--------ASGRREEPRLPPPARRELSSHLASTQRDTRRPPADSGRGSSGKRGWFGL---GRGAERPQEXXXXXXXXXXXXXSWQGRGAASPTGGRGG-REGHSEGQWQGERGRGWTHSGRG 189
            RR     W RAAAL L LA GCLSG  PPSVPPGW+VHFQ+DTPYF+NEKTGETTWEQPR   T   A AV             A+    EPR P  + R+ SS                          FGL            XXXXXXXXXXXXX WQ RGA +P GGRG  RE  S+ QWQG R RGW+HSGRG
Sbjct:    5 RRHSTRCWPRAAALALSLAGGCLSGVAPPSVPPGWTVHFQQDTPYFYNEKTGETTWEQPRRTTTADPATAVAPSAASAATPGYLAAAGTNEPRSPSSSHRDFSSQPXXXXXXXXXXXXXXXXXXXXXX-XFGLRXXXXXXXXXXXXXXXXXXXXXXXXXWQSRGA-TPAGGRGALREERSQEQWQGARDRGWSHSGRG 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1432.3383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K749_9PHAE2.190e-2850.51WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 33..64
e-value: 3.3E-8
score: 43.3
IPR001202WW domainPFAMPF00397WWcoord: 34..62
e-value: 3.0E-7
score: 30.4
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 38..62
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 32..64
score: 14.048
NoneNo IPR availableGENE3D2.20.70.10coord: 31..84
e-value: 1.1E-9
score: 39.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.748
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 29..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1432contigH-canaliculatus_F_contig1432:2072..3587 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1432.3383.1mRNA_H-canaliculatus_F_contig1432.3383.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1432 2072..3611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1432.3383.1 ID=prot_H-canaliculatus_F_contig1432.3383.1|Name=mRNA_H-canaliculatus_F_contig1432.3383.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=201bp
MGARRKPRILWTRAAALVLGLARGCLSGAVPPSVPPGWSVHFQEDTPYFH
NEKTGETTWEQPRLAATTSVAAAVQAHGQASGRREEPRLPPPARRELSSH
LASTQRDTRRPPADSGRGSSGKRGWFGLGRGAERPQEQQQQQQQQEEQQQ
SWQGRGAASPTGGRGGREGHSEGQWQGERGRGWTHSGRGAQAQGAGRPAA
P
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR001202WW_dom