prot_H-canaliculatus_F_contig14272.3358.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14272.3358.1
Unique Nameprot_H-canaliculatus_F_contig14272.3358.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length53
Homology
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: D7G3G7_ECTSI (ER membrane protein complex subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3G7_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 2.990e-23
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 0
Query:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKALDKEEVSHK 52
            MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADK LDKEE+S+K
Sbjct:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKPLDKEELSYK 52          
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: A0A7R9UVV5_DIALT (ER membrane protein complex subunit 3 n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UVV5_DIALT)

HSP 1 Score: 56.6 bits (135), Expect = 4.900e-8
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    4 EHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKAD-KALDKEEV 49
              LVLDPAIRDWV  PL++++ LVG+LRHN T+LL++D K  DKE+V
Sbjct:   20 HELVLDPAIRDWVFLPLIVIMFLVGILRHNATSLLRSDPKPGDKEQV 66          
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: A0A7S3NPS9_9STRA (ER membrane protein complex subunit 3 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPS9_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.290e-7
Identity = 25/49 (51.02%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    4 EHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKALDKEEVSHK 52
            E L+LDPAIRDWVV P++++++L+G+ RH    LLK+ ++LD  E+ HK
Sbjct:    6 EALLLDPAIRDWVVLPMVVLMVLMGLARHYAQQLLKSSQSLDAMEIQHK 54          
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: A0A7S1U0N1_9STRA (ER membrane protein complex subunit 3 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0N1_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.940e-7
Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKALDKEEVSHK 52
            M  E LVLDP+IR+WVV PL++M++ +GV+RH I  LLK+D  +D  ++  K
Sbjct:   63 MADELLVLDPSIRNWVVMPLVMMMLFMGVVRHYIQGLLKSDPVMDAGDIKVK 114          
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: G4TK66_SERID (ER membrane protein complex subunit 3 n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TK66_SERID)

HSP 1 Score: 54.3 bits (129), Expect = 3.150e-7
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALL-----KADKALDKEE 48
            M G+ L LDP IRDWV+FP+ L++ILVGVLRHNI  L+     K  +A  +E+
Sbjct:    1 MAGDSLYLDPQIRDWVLFPITLVMILVGVLRHNIVQLIASSPKKLSRAATREQ 53          
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: S9RN17_SCHOY (ER membrane protein complex subunit 3 n=2 Tax=Schizosaccharomyces TaxID=4895 RepID=S9RN17_SCHOY)

HSP 1 Score: 53.9 bits (128), Expect = 4.090e-7
Identity = 26/47 (55.32%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    4 EHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKAD-KALDKEEV 49
            + L+LDPA+R+WV+ P+M ++IL+GVLRHN T LL++  K L KEE+
Sbjct:    2 QQLLLDPALRNWVLLPIMFIMILIGVLRHNATILLQSSPKRLTKEEI 48          
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: YNY3_SCHPO (ER membrane protein complex subunit 3 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=YNY3_SCHPO)

HSP 1 Score: 53.5 bits (127), Expect = 5.660e-7
Identity = 25/47 (53.19%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    4 EHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKAD-KALDKEEV 49
            + L+LDPA+R+WV+ P+M ++IL+G+LRHN T LL++  K L KEE+
Sbjct:    2 QKLLLDPALRNWVLLPIMFVMILIGILRHNATILLQSSPKKLSKEEI 48          
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: A0A843UR57_COLES (ER membrane protein complex subunit 3 n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UR57_COLES)

HSP 1 Score: 53.5 bits (127), Expect = 6.580e-7
Identity = 24/49 (48.98%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKALDKEEV 49
            M GE LVLD AIRDWV+ PL ++++L+GVLR+ ++ L+++ ++LD++ V
Sbjct:    1 MAGEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSHQSLDQKVV 49          
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: A0A0E9NQN0_SAICN (ER membrane protein complex subunit 3 n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NQN0_SAICN)

HSP 1 Score: 53.1 bits (126), Expect = 8.270e-7
Identity = 23/37 (62.16%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    4 EHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKA 40
            + L LDPA+RDWV+FP++ ++ILVG+LRHNIT LL++
Sbjct:    6 QDLYLDPALRDWVLFPILFVMILVGILRHNITVLLQS 42          
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Match: A0A1D1XCG9_9ARAE (ER membrane protein complex subunit 3 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XCG9_9ARAE)

HSP 1 Score: 53.1 bits (126), Expect = 8.850e-7
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKALDKEEV 49
            M GE LVLD AIRDWV+ PL L+++L+GVLRH +  L+++ +  D + V
Sbjct:   54 MAGEDLVLDTAIRDWVLIPLSLVMVLIGVLRHFVAKLMRSQQLPDHKAV 102          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14272.3358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3G7_ECTSI2.990e-2394.23ER membrane protein complex subunit 3 n=2 Tax=Ecto... [more]
A0A7R9UVV5_DIALT4.900e-861.70ER membrane protein complex subunit 3 n=2 Tax=Diac... [more]
A0A7S3NPS9_9STRA1.290e-751.02ER membrane protein complex subunit 3 n=1 Tax=Aure... [more]
A0A7S1U0N1_9STRA1.940e-750.00ER membrane protein complex subunit 3 n=1 Tax=Phae... [more]
G4TK66_SERID3.150e-752.83ER membrane protein complex subunit 3 n=1 Tax=Sere... [more]
S9RN17_SCHOY4.090e-755.32ER membrane protein complex subunit 3 n=2 Tax=Schi... [more]
YNY3_SCHPO5.660e-753.19ER membrane protein complex subunit 3 n=1 Tax=Schi... [more]
A0A843UR57_COLES6.580e-748.98ER membrane protein complex subunit 3 n=1 Tax=Colo... [more]
A0A0E9NQN0_SAICN8.270e-762.16ER membrane protein complex subunit 3 n=2 Tax=Sait... [more]
A0A1D1XCG9_9ARAE8.850e-751.02ER membrane protein complex subunit 3 (Fragment) n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002809Integral membrane protein EMC3/TMCO1-likePFAMPF01956EMC3_TMCO1coord: 6..48
e-value: 1.9E-9
score: 37.5
IPR008568ER membrane protein complex subunit 3PANTHERPTHR13116UNCHARACTERIZEDcoord: 4..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 15..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14272contigH-canaliculatus_F_contig14272:271..429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14272.3358.1mRNA_H-canaliculatus_F_contig14272.3358.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14272 271..435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14272.3358.1 ID=prot_H-canaliculatus_F_contig14272.3358.1|Name=mRNA_H-canaliculatus_F_contig14272.3358.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=53bp
MGGEHLVLDPAIRDWVVFPLMLMVILVGVLRHNITALLKADKALDKEEVS
HK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008568EMC3
IPR002809EMC3/TMCO1