prot_H-canaliculatus_F_contig14230.3330.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig14230.3330.1
Unique Name	prot_H-canaliculatus_F_contig14230.3330.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	185

Homology

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BLAST of mRNA_H-canaliculatus_F_contig14230.3330.1 vs. uniprot
Match: A0A6H5KDP6_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDP6_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 2.530e-42
Identity = 112/166 (67.47%), Postives = 123/166 (74.10%), Query Frame = 0

Query:    1 MGYGGSESGGWDPVTGLGTINYQELADYLNVPPIPHGPEPEGG-RDRHHAAYVAWIVVLVFGLLSATLFLVYEHRPKLMLSAATLGRSMRNMXXXXXXXXXXXXXXXXXXXXXRNGGW----------GXGSGVSSGGRPRGALTEMVMGSEIGSVGGDAMYRLLE 155
            +GYGGSE+GGWDPVTGLGTINYQ L+D+LN+P  P  P+P GG  DRHHAAY+AWIVVLVFGL++ATL LVYEHRPKLMLSAATLGRSMRNM    XXXXXXXXXXXXXXXXX                X        R RGALTEMVMGS+  S+ GDA Y LLE
Sbjct:  821 LGYGGSETGGWDPVTGLGTINYQALSDFLNIPRSPPRPQPRGGGHDRHHAAYIAWIVVLVFGLIAATLLLVYEHRPKLMLSAATLGRSMRNMGGGVXXXXXXXXXXXXXXXXXXXXXXRSXXXXXXXXXXXXXXXXXXRSRGALTEMVMGSDA-SMAGDASYHLLE 985

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig14230.3330.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig14230.3330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KDP6_9PHAE	2.530e-42	67.47	Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..50
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 51..71
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 72..184
None	No IPR available	TMHMM	TMhelix		coord: 49..71

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig14230	contig	H-canaliculatus_F_contig14230:1167..2642 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig14230.3330.1	mRNA_H-canaliculatus_F_contig14230.3330.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig14230 122..2684 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig14230.3330.1 ID=prot_H-canaliculatus_F_contig14230.3330.1|Name=mRNA_H-canaliculatus_F_contig14230.3330.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=185bp
MGYGGSESGGWDPVTGLGTINYQELADYLNVPPIPHGPEPEGGRDRHHAA
YVAWIVVLVFGLLSATLFLVYEHRPKLMLSAATLGRSMRNMSGRGGNGGN
GGGGGDGYEAYERNGGWGGGSGVSSGGRPRGALTEMVMGSEIGSVGGDAM
YRLLEEDDGGDDNEDDRRLEGQREEEDRDARRSV*