prot_H-canaliculatus_F_contig1420.3310.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1420.3310.1
Unique Nameprot_H-canaliculatus_F_contig1420.3310.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length240
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1420.3310.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 7.870e-87
Identity = 161/234 (68.80%), Postives = 183/234 (78.21%), Query Frame = 0 
Query:    1 QTNKTHAPGWTTKQGRQQQTYQNSSSGRKVAAAADRRPPSPGDSGGPSDWRALAPTTLDSAAVGSLRWGAAGGVLGASGRDMVNGTHVLAETVLHRQLSGNVAIIQLSSDTLSIEYQKGGDYGGGS--TKTADGGVVRSVETAMGDGNTASSPSSMEGEQMVRCDISIKGFHLQGDSLLVHNSKQAQLVKLRGAGLAPKRSDPWPCSARSVAVDDARDQAFVAAGSRVEIFNLQ 232
            +TNK HA GW+TK  R+         G K A A  +RPPSPGDSGGPSDW++L PTTLDSAAVG LRWGAAGGVLGA GRDMV+G HVLAETVLHRQLSGNVA++Q SSDTLSIEYQ+ G         K    G+  + + A  +G  +   S++EGE +VRCDI+IKGFHLQGDSLLVHNSKQAQLVKLRGAGL+PKR DPWPC ARSVAVDDARDQAFVAAGSRVEI+NL+
Sbjct:  364 ETNK-HASGWSTKFNRR---------GSKTAGADLKRPPSPGDSGGPSDWKSLTPTTLDSAAVGLLRWGAAGGVLGAIGRDMVDGAHVLAETVLHRQLSGNVAVVQFSSDTLSIEYQREGXXXXXXXXNKPISSGMATATKGAAIEGGNS---STVEGEHVVRCDITIKGFHLQGDSLLVHNSKQAQLVKLRGAGLSPKRGDPWPCLARSVAVDDARDQAFVAAGSRVEIYNLK 584
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BLAST of mRNA_H-canaliculatus_F_contig1420.3310.1 vs. uniprot
Match: A0A6H5KNV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV4_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 6.780e-52
Identity = 98/148 (66.22%), Postives = 115/148 (77.70%), Query Frame = 0 
Query:   27 GRKVAAAADRRPPSPGDSGGPSDWRALAPTTLDSAAVGSLRWGAAGGVLGASGRDMVNGTHVLAETVLHRQLSGNVAIIQLSSDTLSIEYQKGGD--YGGGSTKTADGGVVRSVETAMGDGNTASSPSSMEGEQMVRCDISIKGFHLQ 172
            G K A A  +RPPSPGDSGGPSDW++L PTTLDSAAVG LRWGAAGGVLGA GRDMV+G HVLAETVLHRQLSGNVA++QLSSDTLSIEYQ+ G+      + K    G+  + + A  +G  +   S++EGE +VRCDISIKGFHLQ
Sbjct:  148 GSKTAGADLKRPPSPGDSGGPSDWKSLTPTTLDSAAVGLLRWGAAGGVLGAIGRDMVDGAHVLAETVLHRQLSGNVAVVQLSSDTLSIEYQREGEGSXXXXNNKPISSGMATATKGAAIEGGNS---STVEGEHVVRCDISIKGFHLQ 292
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1420.3310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH96_ECTSI7.870e-8768.80Intraflagellar transport protein 140 puative n=1 T... [more]
A0A6H5KNV4_9PHAE6.780e-5266.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1420contigH-canaliculatus_F_contig1420:132..2201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1420.3310.1mRNA_H-canaliculatus_F_contig1420.3310.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1420 132..2201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1420.3310.1 ID=prot_H-canaliculatus_F_contig1420.3310.1|Name=mRNA_H-canaliculatus_F_contig1420.3310.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=240bp
QTNKTHAPGWTTKQGRQQQTYQNSSSGRKVAAAADRRPPSPGDSGGPSDW
RALAPTTLDSAAVGSLRWGAAGGVLGASGRDMVNGTHVLAETVLHRQLSG
NVAIIQLSSDTLSIEYQKGGDYGGGSTKTADGGVVRSVETAMGDGNTASS
PSSMEGEQMVRCDISIKGFHLQGDSLLVHNSKQAQLVKLRGAGLAPKRSD
PWPCSARSVAVDDARDQAFVAAGSRVEIFNLQACMGEKL*
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