prot_H-canaliculatus_F_contig1418.3294.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1418.3294.1
Unique Nameprot_H-canaliculatus_F_contig1418.3294.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length736
Homology
BLAST of mRNA_H-canaliculatus_F_contig1418.3294.1 vs. uniprot
Match: A0A6H5K507_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K507_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 2.240e-43
Identity = 179/501 (35.73%), Postives = 231/501 (46.11%), Query Frame = 0
Query:  244 GRCRRAGETGQVRVLAAWSYEVSERHGRGCGGASPPRQILVKVPCVKTSG---GPGNVKKRWGDAPYCLAFNDEVS-GLANDGSTLKGIRTRDH---EGAAPAEAHEAGDRPGGHHSSDNSVDGKEPHEPLAAXXXXXXTTANETLPAAEPAPHSSGRSKAVMVQLPRPPEGEEVLSTTTDGKRGRSGGGNXXXXXXXXXXXXXXXXXXXXSASESSGWQSLPDENEKTPSTSRVIAKLRASVARDTRPSSAASVKSTTASATAAGSGLLPVPVMEVRLGNGIAEAPRRLVAPAAAAXXXXXFAPCDVPAESGARVKRRPRPKSAAGVSVPGRTSSRVGCQRPRETQTCGGAT--GRLGLKDSTPDSAQDETAAAVGVPRIAGQQKGGASGRAQLNPSHPTTWRRPKSAGMANGTGVRRRRDLVTHSDYCFFPSTAAETFAEGSDRSDPETSSVGLFWGGVESQGDVTEWESSFCCSSAEVASAAGYERDTPGSWTEPAGF 735
            G  RR  E G  R     S    E      G  S PRQILVKVPCV+TS    G    K + G APY LA+NDEV+  +A   +     R   H   +G A AE    G   GG   ++ S  GK      A        TA        PAP  +  + AVMVQLPRP EG+E  STT  G+      GN                    SAS+S     L    E  P+TSRVIAKLRASVAR+    S A+  +  A+A A  + LLP+ V+EVR G+      R   +P   A             +     + RPRP+SAAG+S+  +TS R+G Q    T + GG T   R G  ++         AA +G    A  ++G  + +   N     + RRP+SAG     G RRRRD+    +Y FFPS ++     G++    E     +  GGV   GDV+EWE+S C SS E  S AGY  D+PG+W E  GF
Sbjct:   32 GEGRRVEEEGSNRRQGESSGVAGEVVRGNRGAPSSPRQILVKVPCVETSRTACGDAEKKCKRGSAPYRLAWNDEVTTAVAYADNPYVDARNTAHGHDDGKALAEDGAGGCCHGGGQVANKSAKGKGDATRAA------DATAAAAAGLVSPAPGRNNMT-AVMVQLPRPLEGDEASSTTPGGRGVGFDVGNGRGSNSVL------------SASDSGRLSLL---EEARPTTSRVIAKLRASVAREACQGSTAAKLAPGATAAAGPACLLPLTVLEVRPGDAAIPGRRPPSSPGRRAGPHDGH-------KRSVGTRGRPRPQSAAGLSLAAQTSRRIGVQH-HGTASAGGRTRENRRGFVNA---------AATLGPAAAAITRRGATACKTDENVQGANS-RRPQSAGPGENIGDRRRRDVKAQDNYSFFPSASSTGENAGTECGYDEMGVRMILGGGVMLPGDVSEWEASLC-SSTEATSRAGYALDSPGTWREAVGF 491          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1418.3294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K507_9PHAE2.240e-4335.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1418contigH-canaliculatus_F_contig1418:16230..20738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1418.3294.1mRNA_H-canaliculatus_F_contig1418.3294.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1418 16208..21344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1418.3294.1 ID=prot_H-canaliculatus_F_contig1418.3294.1|Name=mRNA_H-canaliculatus_F_contig1418.3294.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=736bp
MVLQQSYYCSSAAKPRRQGFWRNQDSADTTRMASRKRWSGIRAFFGGSWC
EAAAAGSCGGDNININKDDDGMEDNETGWDHSSQASAIARHAPYLRRGKI
VEPSPRLSTQDRRPSAITLARPWTASARPFTRATPSNFGRSTKGAVLTAR
PHSAAGAIGRRSGGGSGAGHMASAGKAWVREISERVAPRRPTSSEIEQSA
IRGEQACRGETQKSGRTGAATAGATGVKGVARGSRHPSPRRGRGRCRRAG
ETGQVRVLAAWSYEVSERHGRGCGGASPPRQILVKVPCVKTSGGPGNVKK
RWGDAPYCLAFNDEVSGLANDGSTLKGIRTRDHEGAAPAEAHEAGDRPGG
HHSSDNSVDGKEPHEPLAAAAAAAATTANETLPAAEPAPHSSGRSKAVMV
QLPRPPEGEEVLSTTTDGKRGRSGGGNGHNGIGGTSHGLGYTYSGLGSAS
ESSGWQSLPDENEKTPSTSRVIAKLRASVARDTRPSSAASVKSTTASATA
AGSGLLPVPVMEVRLGNGIAEAPRRLVAPAAAAAAAPAFAPCDVPAESGA
RVKRRPRPKSAAGVSVPGRTSSRVGCQRPRETQTCGGATGRLGLKDSTPD
SAQDETAAAVGVPRIAGQQKGGASGRAQLNPSHPTTWRRPKSAGMANGTG
VRRRRDLVTHSDYCFFPSTAAETFAEGSDRSDPETSSVGLFWGGVESQGD
VTEWESSFCCSSAEVASAAGYERDTPGSWTEPAGF*
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