prot_H-canaliculatus_F_contig1415.3270.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1415.3270.1
Unique Nameprot_H-canaliculatus_F_contig1415.3270.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length341
Homology
BLAST of mRNA_H-canaliculatus_F_contig1415.3270.1 vs. uniprot
Match: A0A6H5J9M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9M3_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 1.510e-130
Identity = 217/342 (63.45%), Postives = 249/342 (72.81%), Query Frame = 0
Query:    1 MKRFAPKGCLRGLLLISLSLGPVGCFIV-GSSGSVRSAHQQHQRRSSRSVDRPLHQQHYDSGRRESLVARACGGSVIGGKMSLGSERGLPTRRRAGSTAARNRLRQQTKGARLFAAAAAKGDEAEEEGE-EDERGEAQAGGGRKGDALDVEAELEGNYTPEEQEFIRNFYAEYEAAEEPQPDEDERAVFSHDYKMYAGEGGSLDTEWDAAVGKVDCWDLPSYEEFDPKVPPVHYKYYEDDLQANLRSEINPFPLHSEWVDRDVKVGNIEEHKKEAIQPMMSVIEQVCELIDTTDDVFSFKYVGPIRHKKGIASWAMVLIKPLYPEVKGVEFVTKRTRDRTDW 340
            MK    K  LR LLLISLS GPVGCFIV G  G  RS  Q+   R +R VDRPL   +  +     +       S   G M LG +R + T RRAGS   +   R    G RLFAA   +G+E EE  E +D+   A   GG      + E E+E NYTPEE+EF+ NFYAEYEAAEEP+ DEDE AV+ H YKMYAGEGG++++EWDAAVGK D WDLP YE+FDPKVPPVHYKY  ++LQA+L SE+NPFPLHSEWVDRD+KVG+I+E KK AIQPMMSVIEQVC+LIDTTDDVFSFKYVGPIRHKKGIASWAMVLIKPLYP+VKGVEFVT RTRDRTDW
Sbjct:   12 MKSPTTKCFLRVLLLISLSAGPVGCFIVSGGGGRTRSTAQEF--RPNRCVDRPLQSDYAGTNAAAPMAVHPASRSA--GWMGLGGQRSVSTWRRAGSGVDKACWRN---GVRLFAAEG-EGEEDEEAFENDDDEAVALREGGDDRQRSEKEVEVEKNYTPEEREFVENFYAEYEAAEEPERDEDELAVYDHAYKMYAGEGGAIESEWDAAVGKGDIWDLPPYEDFDPKVPPVHYKYSNEELQASLTSEVNPFPLHSEWVDRDIKVGDIDEDKKAAIQPMMSVIEQVCQLIDTTDDVFSFKYVGPIRHKKGIASWAMVLIKPLYPQVKGVEFVTNRTRDRTDW 345          
BLAST of mRNA_H-canaliculatus_F_contig1415.3270.1 vs. uniprot
Match: D7FHK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK5_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 5.610e-91
Identity = 172/312 (55.13%), Postives = 205/312 (65.71%), Query Frame = 0
Query:    1 MKRFAPKGCLRGLLLISLSLGPVGCFIVGSSGSVRSAHQQHQRRSSRSVDRPLHQQHYDSGRRESLVARACGGSVIGGKMSLGSERGLPTRRRAGSTAARNRLRQQTKGARLFAAAAAKGDEAEEEGEEDERGEAQAGGGRKG----DALDVEAELEGNYTPEEQEFIRNFYAEYEAAEEPQPDEDERAVFSHDYKMYAGEGGSLDTEWDAAVGKVDCWDLPSYEEFDPKVPPVHYKYYEDDLQANLRSEINPFPLHSEWVDRDVKVGNIEEHKKEAIQPMMSVIEQVCELIDTTDDVFSFKYVGPIRHKKG 308
            MK    K  LR LL++SLS GPVGCFIV S G  RS     + R +R VDRPL   +  +     +       S   G + LG +R + T RRAGS   R   R+  KG RLFAA        E EGE            R+G       + E E+E NYTPEE+EF+  F+AE+EAAEEP+ DEDE AV+ H YKMYAGEGG++++EWDAAVGK D WDL  YE+FDPKVPPVHYKY  +DLQA+L SE+NPFPLHSEWVDRD+KV NI+E KK AIQPMMSVIEQVC+LIDTTDDVFSFK  GP   ++G
Sbjct:   10 MKPPTTKCFLRILLMLSLSTGPVGCFIV-SGGGGRSRSTAQRLRPNRGVDRPLQSDYAGTNAAAPMAVHPASRSA--GVVDLGGQRSVSTWRRAGSGVDRACWRK--KGVRLFAA--------EGEGEXXXXXXXXXXALREGVDDRQRSEKELEVEKNYTPEEREFVEFFFAEHEAAEEPERDEDELAVYDHGYKMYAGEGGAIESEWDAAVGKGDIWDLSPYEDFDPKVPPVHYKYSNEDLQASLTSEVNPFPLHSEWVDRDIKVANIDEDKKAAIQPMMSVIEQVCQLIDTTDDVFSFK--GPRPPRRG 306          
BLAST of mRNA_H-canaliculatus_F_contig1415.3270.1 vs. uniprot
Match: A0A7S2HE97_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HE97_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 6.890e-10
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 0
Query:  260 DVKVGNIEEHKKEAIQPMMSVIEQVCELIDTTDDVFSFKYVGPIRHKKGIASWAMVLIKPLYPEVKGVEFVTKRTRD 336
            ++K G I+    E IQP++ V  +   +++  D V  FKY G I++K G+ +WA  +I  +YPE+K V+FVTKR RD
Sbjct:  130 NLKQGPIDSDIIERIQPVLDVFRESISILEANDGVLRFKYFGLIKNKIGMEAWAKQMILEVYPELKSVQFVTKRLRD 206          
BLAST of mRNA_H-canaliculatus_F_contig1415.3270.1 vs. uniprot
Match: A0A836CP45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP45_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.890e-6
Identity = 29/69 (42.03%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  271 KEAIQPMMSVIEQVCELIDTTDDVFSFKYVGPIRHKKGIASWAMVLIKPLYPEVKGVEFVTKRTRDRTD 339
            +E I   + V+  V ELID+ D++F+FKY G IR+K GI ++A  +I+ +YP+++ + F T R RD  D
Sbjct:  208 REGIAGPLKVLGSVVELIDSRDNIFTFKYNGQIRNKIGIEAYARQMIQEIYPDMEVLLF-TNRVRDNRD 275          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1415.3270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J9M3_9PHAE1.510e-13063.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHK5_ECTSI5.610e-9155.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2HE97_9STRA6.890e-1041.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CP45_9STRA6.890e-642.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..340
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..28
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..25
score: 0.579
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1415contigH-canaliculatus_F_contig1415:2985..8124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1415.3270.1mRNA_H-canaliculatus_F_contig1415.3270.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1415 2945..8699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1415.3270.1 ID=prot_H-canaliculatus_F_contig1415.3270.1|Name=mRNA_H-canaliculatus_F_contig1415.3270.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=341bp
MKRFAPKGCLRGLLLISLSLGPVGCFIVGSSGSVRSAHQQHQRRSSRSVD
RPLHQQHYDSGRRESLVARACGGSVIGGKMSLGSERGLPTRRRAGSTAAR
NRLRQQTKGARLFAAAAAKGDEAEEEGEEDERGEAQAGGGRKGDALDVEA
ELEGNYTPEEQEFIRNFYAEYEAAEEPQPDEDERAVFSHDYKMYAGEGGS
LDTEWDAAVGKVDCWDLPSYEEFDPKVPPVHYKYYEDDLQANLRSEINPF
PLHSEWVDRDVKVGNIEEHKKEAIQPMMSVIEQVCELIDTTDDVFSFKYV
GPIRHKKGIASWAMVLIKPLYPEVKGVEFVTKRTRDRTDW*
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