prot_H-canaliculatus_F_contig1411.3254.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1411.3254.1
Unique Nameprot_H-canaliculatus_F_contig1411.3254.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length605
Homology
BLAST of mRNA_H-canaliculatus_F_contig1411.3254.1 vs. uniprot
Match: A0A6H5KG66_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG66_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 6.300e-117
Identity = 299/630 (47.46%), Postives = 344/630 (54.60%), Query Frame = 0
Query:    1 DDRLWLLRSKSEQS-RRRKGGGRCHSFSLSLVPCVARAVSRTTAPSHCFELHAQNRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYARCRRLNVTLACALGGRACDSLEGDYYSSRGSDRPSTGGXXXXXXXXXXXXXXDEXXXXXXXXXXXGWLPLPPPPALVPRTSGLFRRLPLPLPSAPLSSGAPPVKHDQSRFGSRSPSPPLLPPXXXQPLVAPENAAVSDFLDGGPGDWRSLGTWGSG-TSEGGVR--LRAIEVKRALRFCMKVHRFRETCRPGSCVAYRRRWAYAADALEELCPGASTAAVAADLSRYWQSPPPLSAVAVASMSLTSSSAAGKECVGGDGGPTASKNSG-GGVGESGETDQGRMSIITNNREEQPTHSCSARAAPAFSMRVDSASPRAPLSTMGTSRI--VTTAESA-------AVSTANEKACGEA--ASATHLASPPATPTSIASTLPVAEGVTLPPAALQTPPLLTATATLAELHSQRSSPPQGRQQVDEQGIPWPAAACSQETLFAVSRELRRYAEMVAKVRSSRPSKLGGDTASKRSAAGGALGAGASGRTDGR----------AAFPSPLVHEPPPEELFDALLDEVLQALGDS 604
            DDRLWLLRSKSEQS RRR GGGR HSFSL+LVP VARAV+  TAPSHCFELH+ NRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYARCRRLNV L+ ALG R CD+LE ++YSS  +DRP  G                            GWLPLP P  L PRTSGLFRRLP      P                  +P        XX          ++   DGG     + G  G G T +   R  L A EV+RA+RFCMKVHR+RE CRPGSCVA+R+RWAYAADALEELCPGAST A AADLSR+W  PPPL+AV    +SL +  A G+    GD  P     SG    G     D    +   +NR+E+      + A PA S R D    RA   T G S     T+ E+        AV  +  K  GE    + + L+ PP      ASTLPVAE V LP     +P LLT               P+  Q    Q      AACSQET+  V+R+LR Y E V + R+SR +K GG             G GA                 AA  + L  EPP E LFDALLD+VLQALGD+
Sbjct:  469 DDRLWLLRSKSEQSGRRRGGGGRSHSFSLALVPSVARAVNHPTAPSHCFELHSHNRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYARCRRLNVALSSALGSRTCDTLEAEFYSSHVADRPVAG-----------------RCSSGGGSVGGGWLPLPHPTPL-PRTSGLFRRLP----QGPXXXXXXXXXXXXXXXXRATPGLVSGSQSXXXXXXXXXXXXLARSADGGATASSARGAAGGGATIDSAERPWLAASEVRRAMRFCMKVHRYREICRPGSCVAFRKRWAYAADALEELCPGASTTA-AADLSRHWNPPPPLAAVEA--VSLPALGAGGESA--GDDVPYGRDESGIEAAGPRSGFDAAAAATANDNRDEKSPSGIRSEA-PATSPRGDQ---RAAAVTSGPSSTSAATSGEACSASLRTTAVFASPRKVDGEGRPTNLSGLSPPPTAAAVSASTLPVAEAVALPTDDRTSPTLLTXXXXXXXXXXXTELVPRPSQSSTHQHALSLVAACSQETVVGVARDLREYVEAVTRSRASRAAKGGGG------------GDGAXXXXXXXXXXXXXXXXXAAGENGL-QEPPAECLFDALLDQVLQALGDA 1054          
BLAST of mRNA_H-canaliculatus_F_contig1411.3254.1 vs. uniprot
Match: D8LCW3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW3_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 2.950e-107
Identity = 283/617 (45.87%), Postives = 327/617 (53.00%), Query Frame = 0
Query:    1 DDRLWLLRSKSEQSRRRKGGGRCHSFSLSLVPCVARAVSRTTAPSHCFELHAQNRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYARCRRLNVTLACALGGRACDSLEGDYYSSRGSDRPSTGGXXXXXXXXXXXXXXDEXXXXXXXXXXXGWLPLPPPPALVPRTSGLFRRLPLPLPSAPLSSGAPPVKHDQSRFGSRSPSPPLLPPXXXQPLVAPENAAVSDFLDGGPGDWRSLGTWGS-----GTSEGGVR--LRAIEVKRALRFCMKVHRFRETCRPGSCVAYRRRWAYAADALEELCPGASTAAVAADLSRYWQSPPPLSAVAVASMSLTSSSAAGKECVGGDGGPTASKNSG--GGVGESGETDQGRMSIITNNREEQPTHSCSARAAPAFSMRVDSASPRAPLSTMGTSRIVTTAESAAVSTANEKACGEAASAT--HLASPPATPTSIASTLPVAEGVTLPPAALQTPPLLTATATLAELHSQRSS--PPQGRQQVDEQGIPWPAAACSQETLFAVSRELRRYAEMVAKVRSSRPSKLGGDTASKRSAAGGALGAGASGRTDGRAAFPSPLVHEPPPEELFDALLDEVLQALGDS 604
            DDRLWLLRSKSEQS RR+GGGR HSFSL+L            APSHCFELH+QNRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYARCRRLNVTL+ ALG RACD+LE D+YSS  +DRP  G                     XXXXXXXGWLPLPPP  L PRTSGLFRRLP          G PP  +  S   S   + P L      PL+                                T +   R  L A EV+RA+RFCMKVHR+RE CRPGSCVA+R+RWAYAADALEELCPGASTAA AADLSR+W  P PL  VAV ++SL +  A+G+     DGGP     SG       S               E++P                                   +  ++ V  +  +A GE    T   L+ PP      AS LP+AE V LP     +P LLTA           +   P   R    +  +   AAACSQET+  V+R+LR Y E V + R+SR +K GG                        A   S  + EPP E LFDALLD+VLQALGD+
Sbjct:  517 DDRLWLLRSKSEQSGRRRGGGRSHSFSLAL------------APSHCFELHSQNRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYARCRRLNVTLSSALGSRACDTLEADFYSSHAADRPVAG----------------RGSSGXXXXXXXGWLPLPPPSPL-PRTSGLFRRLP---------QGPPPTTYSASAAASAVRATPGLVSGCRSPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATVDSAERPWLAASEVRRAMRFCMKVHRYREICRPGSCVAFRKRWAYAADALEELCPGASTAA-AADLSRHWNPPSPL--VAVEAVSLPALRASGESAA--DGGPHERDESGIEAAGSRSXXXXXXXXXXXXXRDEKKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLRTSTVLASPREADGEGRPTTLSGLSPPPMAAAVSASILPMAEAVALPTGDRPSPALLTAXXXXXXXXXSATELVPRPSRSSTHQHALSL-AAACSQETVVGVARDLREYVEAVTRSRASRAAK-GGXXXXXXXXXXXXXXXXXXXXXXXXAGENS--LQEPPAEGLFDALLDQVLQALGDA 1086          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1411.3254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG66_9PHAE6.300e-11747.46PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LCW3_ECTSI2.950e-10745.87PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..98
e-value: 4.8E-7
score: 31.3
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 1..79
score: 7.082
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 10..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1411contigH-canaliculatus_F_contig1411:22883..26666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1411.3254.1mRNA_H-canaliculatus_F_contig1411.3254.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1411 22883..26666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1411.3254.1 ID=prot_H-canaliculatus_F_contig1411.3254.1|Name=mRNA_H-canaliculatus_F_contig1411.3254.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=605bp
DDRLWLLRSKSEQSRRRKGGGRCHSFSLSLVPCVARAVSRTTAPSHCFEL
HAQNRVHTFRAESRAKQVAWVGTLQRHARQAAEDSYMSVAEHMVCDEEYA
RCRRLNVTLACALGGRACDSLEGDYYSSRGSDRPSTGGGGGGSGGGTGFG
VGDEGWGTGGGSVGGGWLPLPPPPALVPRTSGLFRRLPLPLPSAPLSSGA
PPVKHDQSRFGSRSPSPPLLPPPPPQPLVAPENAAVSDFLDGGPGDWRSL
GTWGSGTSEGGVRLRAIEVKRALRFCMKVHRFRETCRPGSCVAYRRRWAY
AADALEELCPGASTAAVAADLSRYWQSPPPLSAVAVASMSLTSSSAAGKE
CVGGDGGPTASKNSGGGVGESGETDQGRMSIITNNREEQPTHSCSARAAP
AFSMRVDSASPRAPLSTMGTSRIVTTAESAAVSTANEKACGEAASATHLA
SPPATPTSIASTLPVAEGVTLPPAALQTPPLLTATATLAELHSQRSSPPQ
GRQQVDEQGIPWPAAACSQETLFAVSRELRRYAEMVAKVRSSRPSKLGGD
TASKRSAAGGALGAGASGRTDGRAAFPSPLVHEPPPEELFDALLDEVLQA
LGDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf