prot_H-canaliculatus_F_contig14072.3221.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14072.3221.1
Unique Nameprot_H-canaliculatus_F_contig14072.3221.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length310
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14072.3221.1 vs. uniprot
Match: D8LI16_ECTSI (NAGPA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI16_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 2.540e-122
Identity = 208/305 (68.20%), Postives = 232/305 (76.07%), Query Frame = 0 
Query:    1 QDQVHDPVLYFDGESAPAEETEEGAENAFLRTVAITMNCSTPNATLRYTVDGFSVPGDASPSVSPGTVVQWSEEGATEFRVVAVADGLYQSELTKWPVSILAPRTDEFPVATGYGEEQEGTSXXXXXXXXXXXXXXXXXVEVTAFEAVYAAPAAELEQEEMLGPGYGGECEGGARVVRGKLLRLANPSRHFSFAPPPGACDGDGGE-VLSPAADTIRAFQTTRQTAPLLDGETLAEARIRLDLDAREAAWRAAGGGSGCQAATAAGLLPAAVAAAAADGDAGYGESCAVGHLVGAGQVYNAEEGT 304
            Q+QV DP L+F GESA A+ T+E  ENAFLRTVAITMNCSTPN T+RYT DG SVPGD SPSV PGTVVQWSEEG  EFRVVAVADGLYQSELT WPV+I+APRTDE+PVA   G+                         VTAFEAVYAAPAAELEQ+E+LGPGYG +CEGGARVVRGKLLR+ NPS HFSFAPPPGAC GDG E  LSPA+ T R F+  R+TAPLLDGE+  +AR+RLDLD+REAAWRAAGGG+GCQAA A G+LP           +G G SCAVGHLVGAGQV+ AEEGT
Sbjct:  365 QEQVEDPALFFAGESATADVTDE--ENAFLRTVAITMNCSTPNTTVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLYQSELTMWPVTIVAPRTDEYPVAGSSGD-------------------------VTAFEAVYAAPAAELEQQEVLGPGYGDQCEGGARVVRGKLLRVFNPSGHFSFAPPPGACGGDGEEHALSPASQTSRGFEAVRRTAPLLDGESPEDARVRLDLDSREAAWRAAGGGNGCQAAAAGGMLPPL---------SGDGGSCAVGHLVGAGQVFQAEEGT 633
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14072.3221.1 vs. uniprot
Match: A0A6H5KNM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM8_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 4.320e-51
Identity = 94/119 (78.99%), Postives = 101/119 (84.87%), Query Frame = 0 
Query:    1 QDQVHDPVLYFDGESAPAEETEEGAENAFLRTVAITMNCSTPNATLRYTVDGFSVPGDASPSVSPGTVVQWSEEGATEFRVVAVADGLYQSELTKWPVSILAPRTDEFPVATGYGEEQE 119
            QDQV DP L+F GESA A+ T+E  ENAFLRTVAITMNCSTPNAT+RYT DG SVPGD SPSV PGTVVQWSEEG  EFRVVAVADGLYQSELTKWPV+I+APRTDE+PVA   G E E
Sbjct:  382 QDQVEDPALFFAGESATADVTQE--ENAFLRTVAITMNCSTPNATVRYTTDGVSVPGDTSPSVEPGTVVQWSEEGTWEFRVVAVADGLYQSELTKWPVTIVAPRTDEYPVAGSSGGETE 498
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14072.3221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI16_ECTSI2.540e-12268.20NAGPA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KNM8_9PHAE4.320e-5178.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14072contigH-canaliculatus_F_contig14072:130..2178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14072.3221.1mRNA_H-canaliculatus_F_contig14072.3221.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14072 130..2178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14072.3221.1 ID=prot_H-canaliculatus_F_contig14072.3221.1|Name=mRNA_H-canaliculatus_F_contig14072.3221.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=310bp
QDQVHDPVLYFDGESAPAEETEEGAENAFLRTVAITMNCSTPNATLRYTV
DGFSVPGDASPSVSPGTVVQWSEEGATEFRVVAVADGLYQSELTKWPVSI
LAPRTDEFPVATGYGEEQEGTSGTSSGGDSGDSGDMLAMVEVTAFEAVYA
APAAELEQEEMLGPGYGGECEGGARVVRGKLLRLANPSRHFSFAPPPGAC
DGDGGEVLSPAADTIRAFQTTRQTAPLLDGETLAEARIRLDLDAREAAWR
AAGGGSGCQAATAAGLLPAAVAAAAADGDAGYGESCAVGHLVGAGQVYNA
EEGTGEQAK*
back to top