prot_H-canaliculatus_F_contig1407.3219.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1407.3219.1
Unique Nameprot_H-canaliculatus_F_contig1407.3219.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length478
Homology
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A6H5L249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L249_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 1.120e-101
Identity = 242/491 (49.29%), Postives = 280/491 (57.03%), Query Frame = 0
Query:    2 QWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXX-----VRERRRRCLEWCLDHGLEYVEADCRDVQRGGELREKEGVPRVVEALQSNVWTGMEFRTDNRPSLMAAAXXXXXXXXXXXXXXXIGGVGSVSR--------SSSGGEXGTAT-LSPSVG-DGEEEVSEYLSGFVNGDDGDAEYAGYGALDSGDXXXXXXXXXXXXXXXXXXGQNGGGTGQEDXXEGRDEDEVGVDATHIELQARWEQPDLSSPS-PGAGRDASGVAAPQLAEDVAASRQDRSLETANPSSEPVGGTAPVHEGDGGKIAADEENTTGLVAKTGXXXXXXXSASVRHEGGAELPGNFSXXXXXXXXXXTEHDCCREGADVMGGRGKGAGKAESSTKSSEERMLEAVGSMFGGLGGESEGDEMELLMGEVRKARELGDSVPDDERRARAENVAMKLAALLGDLGEDSEDDE 476
            QWAA ++DR++CAFR+CVGSKLDLL ++  +G      AGFG   AET       G      XXXXXXX     +RERRRRCL WCLDHG EYVEADCRD   GGELREKEGVPR+VEALQSNVWT MEF + NRPSLMAA                 G VG V           SSGGE GTA  LS + G DG  EVSEYL GFV+ DD   +YAGYGALDSGD                  G   GG G     EG D   V VD +HIELQARWEQ D SS S P AG DA+  A   L  +    +  RS      ++ P   TAP H+G        ++N     +K G       SA+    GG   PG  S              C R GA   G   +G G  E+++K SEE +LEA GSM GG+GG+ EGDEME LMGEVRKARELG SV D+ERR+RA NVAM+LAALLGDLG+ S +D+
Sbjct:  131 QWAALMEDREECAFRVCVGSKLDLLPQDPGDG------AGFGTG-AETTLEPAESGLEGDAAXXXXXXXXXXEGLRERRRRCLGWCLDHGFEYVEADCRDSNTGGELREKEGVPRIVEALQSNVWTDMEFLSSNRPSLMAAVATAAVGGSRND-----GAVGDVXXXXXXXSVSESSGGEDGTAAALSSTAGADGGHEVSEYLHGFVDVDDEGGKYAGYGALDSGDEEEGGDGDGQVAGEWSRGGVEEGGAGA--PREGGDG--VVVDPSHIELQARWEQQDHSSSSLPDAG-DATNAATAALPSEQ---QSGRSCNDQQGAAAPERDTAPSHDG-------RKKNAEMFPSKPGD------SAANTPTGGTTAPGG-SCAGQSDGGNGEGGSCRRAGAAAAG---EGTGDGEAASKESEEYLLEAAGSMVGGIGGDLEGDEMEQLMGEVRKARELGGSVSDEERRSRAANVAMRLAALLGDLGDHSGEDD 584          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: D7FHG9_ECTSI (IRC6, uncharacterized protein interacting with AP adaptor complexes n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG9_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 3.060e-97
Identity = 252/492 (51.22%), Postives = 281/492 (57.11%), Query Frame = 0
Query:    2 QWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELREKEGVPRVVEALQSNVWTGMEFRTDNRPSLMAA----AXXXXXXXXXXXXXXXIGGVGSVSRSSSGGEXGTATLS-PSVGDGEEEVSEYLSGFVNGDDGDAEYAGYGALDSGDXXXXXXXXXXXXXXXXXXGQNG--------GGTGQEDXXEGRDEDEVGVDATHIELQARWEQPD-LSSPSPGAGRDASGVAAPQLA---EDVAASRQDRSLETANPSSEPVGGTAPVHEGDGGKIAADEENTTGLVAKTGXXXXXXXSASVRHEGGAELPGNFSXXXXXXXXXXTEHDCCREGADVMGGRGKGAGKAESSTKSSEERMLEAVGSMFGGLGGESEGDEMELLMGEVRKARELGDSVPDDERRARAENVAMKLAALLGDLGEDSEDDE 476
            QWAA V+DR++CAFR+CVGSKLDLL E+  +G       GFG   AETA      G             ++ERR RCL WCLDHG EYVEADCRD   GGELREKEGVPR+VEALQSNVWTGMEF + NRPSLMAA    A               +GG GSVS SS    X  A LS      G  E SEYL GFV+ DD   EYAGYGALDSGD       XXXXXXXXXXX            GG G     EGR    V VD +HIELQARWEQ D  SS SPGAG DA+  AA   A   E+ AA    RS      ++ P   TAP H  DGGK      N   L +K G       S +     G   PG         XXXX     CR         G G G+A S  K SEE +LEA GSM GG+GG+ EGDEME LMGEVRKARELG SV D+ERR+RA NVAM+LAALLGD G+DS +D+
Sbjct:   51 QWAALVEDREECAFRVCVGSKLDLLPEDPGDG------TGFGTG-AETAPEPAESGLEGGDAAAAEG--LQERRSRCLGWCLDHGFEYVEADCRDSYTGGELREKEGVPRIVEALQSNVWTGMEFLSSNRPSLMAAVATAAAGGSRNDGAAGDGGNVGGTGSVSGSSXXXXXXXAALSFAXXXXGGHEASEYLDGFVDVDDEGGEYAGYGALDSGDEEEGGDGXXXXXXXXXXXXXXXXXXXXVEEGGAGA--PREGRGG--VVVDPSHIELQARWEQQDHSSSSSPGAG-DATNAAAADTALPSEEQAA----RSCNDQQGAAAPGRDTAPSH--DGGK-----NNAEILPSKPGD------SVASTPADGTTAPGG--SCAGQSXXXXXXXXSCRGAXXXXXXEGTGDGEAAS--KESEEYLLEAAGSMVGGIGGDLEGDEMERLMGEVRKARELGGSVSDEERRSRAANVAMRLAALLGDFGDDSGEDD 507          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A835Z725_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z725_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.420e-10
Identity = 45/123 (36.59%), Postives = 58/123 (47.15%), Query Frame = 0
Query:    2 QWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSLAETARAEGRGGXXXXXXXXXXXXXVRERRRRCLEWCLDHGLEYVEADCRDVQRGGELREKEGVPRVVEALQSNVWTGM 124
            +W  F D+RD  A R+ V SK   L +                 +A+   A+G                +  RR   + WCLDHG EY+EA+C     GG+ REKEGVPRVVEALQS  W  +
Sbjct:   96 EWGTFCDERDALALRLLVASKASHLRK---------------LQMADLF-ADG--------------DEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASI 188          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A7S2S1P7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S1P7_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.580e-5
Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   72 RERRRRCLEWCLDHGLEYVEADCRDVQR--GGELREKEGVPRVVEALQSNVWT 122
            +E  RR L WCLD G EYVEAD  +  +  G ++REK+G PR++EA+Q  VW+
Sbjct:    4 KEYSRRVL-WCLDRGYEYVEADLSEKGQSTGHDVREKDGFPRIIEAIQGTVWS 55          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A7S2A3A3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A3A3_TRICV)

HSP 1 Score: 54.3 bits (129), Expect = 6.820e-5
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   73 ERRRRCLEWCLDHGLEYVEADCRD--VQRGGELREKEGVPRVVEALQSNVWT 122
            E  RR L WCLD G EYVEAD  +  ++ G + REKEG  R+VEA++S VW+
Sbjct:    2 EYSRRVL-WCLDRGYEYVEADLSEKGIRSGHDEREKEGFARIVEAVESTVWS 52          
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Match: A0A3N7G3N3_POPTR (Uncharacterized protein n=8 Tax=Saliceae TaxID=238069 RepID=A0A3N7G3N3_POPTR)

HSP 1 Score: 56.2 bits (134), Expect = 7.510e-5
Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 0
Query:   72 RERRRRCLEWCLDHGLEYVEADCRDVQRGGELR---EKEGVPRVVEALQSNVWTGMEFRTDNR 131
            RE +R C+EWC DHG+EY+EA   +V     L    + +GV R+  AL +++W GM  ++DN+
Sbjct:  183 REIKRSCIEWCTDHGIEYIEACASNVDFDKCLLVDGDSQGVERLYGALSAHMWPGMILKSDNK 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1407.3219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L249_9PHAE1.120e-10149.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHG9_ECTSI3.060e-9751.22IRC6, uncharacterized protein interacting with AP ... [more]
A0A835Z725_9STRA1.420e-1036.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S1P7_9STRA2.580e-550.94Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S2A3A3_TRICV6.820e-553.85Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A3N7G3N3_POPTR7.510e-541.27Uncharacterized protein n=8 Tax=Saliceae TaxID=238... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 208..233
NoneNo IPR availablePFAMPF10199Adaptin_bindingcoord: 105..460
e-value: 2.7E-9
score: 37.6
IPR019341Alpha/gamma-adaptin-binding protein p34PANTHERPTHR14659FAMILY NOT NAMEDcoord: 2..473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1407contigH-canaliculatus_F_contig1407:14607..19209 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1407.3219.1mRNA_H-canaliculatus_F_contig1407.3219.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1407 13801..21676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1407.3219.1 ID=prot_H-canaliculatus_F_contig1407.3219.1|Name=mRNA_H-canaliculatus_F_contig1407.3219.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=478bp
MQWAAFVDDRDQCAFRICVGSKLDLLTEEAEEGGASAGGAGFGQSLAETA
RAEGRGGGGEGAGGGNEGGGVRERRRRCLEWCLDHGLEYVEADCRDVQRG
GELREKEGVPRVVEALQSNVWTGMEFRTDNRPSLMAAAAAASGPPGGVGG
GGNIGGVGSVSRSSSGGEGGTATLSPSVGDGEEEVSEYLSGFVNGDDGDA
EYAGYGALDSGDDEEEEEEEEEEEEEKEEEGQNGGGTGQEDGGEGRDEDE
VGVDATHIELQARWEQPDLSSPSPGAGRDASGVAAPQLAEDVAASRQDRS
LETANPSSEPVGGTAPVHEGDGGKIAADEENTTGLVAKTGGGGAATESAS
VRHEGGAELPGNFSGGGGGGGGGGTEHDCCREGADVMGGRGKGAGKAESS
TKSSEERMLEAVGSMFGGLGGESEGDEMELLMGEVRKARELGDSVPDDER
RARAENVAMKLAALLGDLGEDSEDDER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019341Alpha/Gamma-adaptin-bd_p34