prot_H-canaliculatus_F_contig1405.3210.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1405.3210.1
Unique Nameprot_H-canaliculatus_F_contig1405.3210.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length307
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1405.3210.1 vs. uniprot
Match: D7FQ16_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ16_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 1.040e-75
Identity = 134/185 (72.43%), Postives = 150/185 (81.08%), Query Frame = 0 
Query:  122 QTSVTLLKLNTAVGHDLAALLSMSLVDVLAARGPALHRLVVAAAVQSPKXXXXPTAAATIPPDAVCTFSCGVGSDESSSSSVSSFPSLSKLPPLPTGARIADLFLTTLVRLCELEGLPLTVLARVGYRTTGAAADVDGTDEAINSLGQCLAEAMGLEFSSEKACGARRSKGWRGAAPAQLVPGYI 306
            + SVTLLKLNTAVG  L+A LS+SLVD+L AR   L RL++AAAVQ PK    P  AATIPPDAVCTFSCG G D +SS   +S   LS LP LPTGARIAD FLTTLVRLC LE +PLTVLARVGYRTTGAAADVDGTDEAIN LGQCLA+A+GLEF+S +ACG RRSKGW+G+  AQ+VPGYI
Sbjct:   87 EPSVTLLKLNTAVGQGLSASLSLSLVDLLVARRTTLDRLIIAAAVQPPKRHQIPAEAATIPPDAVCTFSCG-GVDSNSSPLPAS---LSTLPSLPTGARIADSFLTTLVRLCRLEDVPLTVLARVGYRTTGAAADVDGTDEAINGLGQCLAQAVGLEFNSNRACGVRRSKGWKGSPSAQVVPGYI 267
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1405.3210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ16_ECTSI1.040e-7572.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..306
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1405contigH-canaliculatus_F_contig1405:3593..5896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1405.3210.1mRNA_H-canaliculatus_F_contig1405.3210.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1405 3411..6753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1405.3210.1 ID=prot_H-canaliculatus_F_contig1405.3210.1|Name=mRNA_H-canaliculatus_F_contig1405.3210.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=307bp
MDHDKRLTTARGSFSEAAQAFVGVALLVAMYARGVVSPHTPPRSVSRFGR
CKIDAPFLSTHLITSSLRAPRVSASLASHGTKGLKLETLCGHRSTSSRLV
QDPESVLHSASPFRTPRVVFSQTSVTLLKLNTAVGHDLAALLSMSLVDVL
AARGPALHRLVVAAAVQSPKRHQLPTAAATIPPDAVCTFSCGVGSDESSS
SSVSSFPSLSKLPPLPTGARIADLFLTTLVRLCELEGLPLTVLARVGYRT
TGAAADVDGTDEAINSLGQCLAEAMGLEFSSEKACGARRSKGWRGAAPAQ
LVPGYI*
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