prot_H-canaliculatus_F_contig1394.3129.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1394.3129.1
Unique Nameprot_H-canaliculatus_F_contig1394.3129.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length586
Homology
BLAST of mRNA_H-canaliculatus_F_contig1394.3129.1 vs. uniprot
Match: D8LJR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR3_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 5.840e-90
Identity = 267/456 (58.55%), Postives = 299/456 (65.57%), Query Frame = 0
Query:    1 MATRIGLLRARGRSLGAQLLHGQQKLCISTGNTGNGSVRFLARLSSSHPAATAGSNSNAVEGSAP--ASSLVFSXXXXXXXXXRVLSSPFLGRANSRISSSSRSGRSAQALFSSTSA-RPS-DDGISAEVEGGDNDGSPS---PAPMKFDGSSKKDRLANLDDGDKYEDFVDLRLTEADKLYPEGPAGSGQGALERAMTRGSSTAVLRREAAEALIHSIDGFAAAATGEAADAGAPFGIEGTASDKWRKARXXXXXXXXXXXXXXXXXXXXXXXXXXVAGETGESASGNEVDEDDDIVGDVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKTVLGSGPIWEEMRALAHSKRKPLKNVRRVSVQPGQRSYLLTGPRGSGKSCILNQAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLKGLYDLPVQVEK 449
            MATR GL+RARG S  AQL+H Q +  IS        VR LARLSSS       S S A++GSA   +SS                SS FLGR +S        G   +ALFSST+A RP+ ++G + + + G +  S S   P    FDG +  DRLA LDDGDKYEDF DLRL EA+ ++PEG AG GQGALERAM  G+STA+LRREAA+ALIHS+D FA     E   A  PFGIEGT+S+ WRK             XXXXXXXXXXXXXXX                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            K VLGSGP+WEEM+ALA SKRKPLK VRRV +QPGQRSYLLTG RGSGKSC+L+ AVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVL+GLYDLPVQ  K
Sbjct:    1 MATRFGLIRARGHSCRAQLVHDQLQSSIS-------GVRLLARLSSSS------SRSTALKGSASGSSSSAPLGFRPPAHRHQYPASSIFLGRRDS--------GSCGKALFSSTTATRPAPEEGAAQDSDPGHSSSSSSGSKPGRKTFDGGNNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGGQGALERAMAGGTSTALLRREAADALIHSLDAFAP----EDGGAAPPFGIEGTSSENWRKVSEARQYGSQQDGXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPEQEEGKGGEDKKVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQRSYLLTGRRGSGKSCVLDHAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLEGLYDLPVQSMK 419          
BLAST of mRNA_H-canaliculatus_F_contig1394.3129.1 vs. uniprot
Match: A0A6H5KXH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH7_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 3.790e-44
Identity = 209/397 (52.64%), Postives = 233/397 (58.69%), Query Frame = 0
Query:    1 MATRIGLLRARGRSLGAQLLHGQQKLCISTGNTGNGSVRFLARLSSSHPAATAGSNSNAVEGSAP--ASSLVFSXXXXXXXXXRVLSSPFLGRANSRISSSSRSGRSAQALFSSTSA-RPSDDGISAEVEGGDNDGSPS----------PAPMKFDGSSKKDRLANLDDGDKYEDFVDLRLTEADKLYPEGPAGSGQGALERAMTRGSSTAVLRREAAEALIHSIDGFAAAATGEAADAGAPFGIEGTASDKWRKARXXXXXXXXXXXXXXXXXXXXXXXXXXVAGETGESASGNEVDEDDDIVGDVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKTVLGSGPIWEEMRALAHSKRKPLKNVRRVSVQPGQ 384
            MATR+GL+RARG S  AQL+HG  +  IS        VR LARLSSS       S + AV+GS    +SS   +            SS FLGR++S        G   +ALFSST+A RP      A  EG   D  P           P    FDG    DRLA LDDGDKYEDF DLRL EA+ ++PEG AG  QGALERAM  G+STA+LRREAA+ALIHS+D FA     E   A  PFGIEGT+S+ WRKA           XXXXXXXXXXXXXXXX                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             K VLGSGP+WEEM+ALA SKRKPLK VRRV +QPGQ
Sbjct:    1 MATRVGLIRARGHSCRAQLVHGPLQSSIS-------GVRLLARLSSS-------SRNTAVKGSPSGRSSSAPLAFRPPDRRHQYPASSIFLGRSDS--------GSGGKALFSSTTATRP------AHEEGAAQDSDPGRSSXXXXXXKPGRKTFDGKDNDDRLARLDDGDKYEDFFDLRLAEAETIFPEGLAGGRQGALERAMAGGTSTALLRREAADALIHSLDAFAP----EHGGAVPPFGIEGTSSENWRKACEARQYGSQQDXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGPEQEEGRGREDKKVLGSGPVWEEMKALAESKRKPLKGVRRVVIQPGQ 350          
BLAST of mRNA_H-canaliculatus_F_contig1394.3129.1 vs. uniprot
Match: W7TU02_9STRA (Mitochondrial 28s ribosomal s29-like protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU02_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.090e-7
Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 0
Query:  371 PLKNVRRVSVQPGQRS-YLLTGPRGSGKSCILNQAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLKGLYDLP 444
            P +  R      G RS +LL+GPRGSGK+  L  AV +AR +GW+V FVP     + +G   +PSP  +G +D P
Sbjct:  404 PTEGGREXXXXXGVRSIFLLSGPRGSGKTATLYHAVHYARRSGWVVFFVPSAFEYLHEGGLIRPSPFYRGYFDTP 478          
BLAST of mRNA_H-canaliculatus_F_contig1394.3129.1 vs. uniprot
Match: F0XXL1_AURAN (Fe2OG dioxygenase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXL1_AURAN)

HSP 1 Score: 63.5 bits (153), Expect = 8.010e-7
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 0
Query:  382 PGQRSYLLTGPRGSGKSCILNQAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLKGLYDLP 444
            P + +YLLTGPRG+GKS  L   V  AR+ GW+ L+VP G ++   G Y  PSP   G+++ P
Sbjct:  118 PRRDAYLLTGPRGAGKSVALATVVSWARANGWLALYVPRGWDVANAGDYVVPSPHHAGMFEEP 180          
BLAST of mRNA_H-canaliculatus_F_contig1394.3129.1 vs. uniprot
Match: A0A1Z5JXK7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXK7_FISSO)

HSP 1 Score: 62.4 bits (150), Expect = 1.650e-6
Identity = 31/102 (30.39%), Postives = 56/102 (54.90%), Query Frame = 0
Query:  354 SGPIWEEMRALAHSKRKPL------KNVRRVSVQPGQRSYLLTGPRGSGKSCILNQAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLKGLYDLPVQVEK 449
            +G + EE    AH   K +      + +     +    S L++G +G GK+  +   V  ARS+G++VL++P+G  L Q G Y +P+P  KG++D+P+  ++
Sbjct:  254 NGNMVEEWELAAHKTSKRIMIRTSTQRIASALTEHTATSILVSGCQGVGKTAAVAAIVASARSSGYLVLYLPNGDQLHQNGFYVEPNPQKKGIFDIPIMSQR 355          
BLAST of mRNA_H-canaliculatus_F_contig1394.3129.1 vs. uniprot
Match: A0A7S4RCC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RCC4_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.840e-5
Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 0
Query:  381 QPGQRSYLLTGPRGSGKSCILNQAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLKGLYDLPVQVEKEPALCLPLL 458
            + G +   + G RG GK+  L   V  AR++G IVL++PDG  L + G Y +P+  L+GL+DLPV  ++   +C  LL
Sbjct:  310 EEGGKRVFVHGKRGVGKTAALAAIVASARTSGNIVLYLPDGDRLRKLGFYIEPNTHLEGLFDLPVLAKE---ICSQLL 384          
BLAST of mRNA_H-canaliculatus_F_contig1394.3129.1 vs. uniprot
Match: A0A7S2XP72_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP72_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 5.150e-5
Identity = 35/103 (33.98%), Postives = 55/103 (53.40%), Query Frame = 0
Query:  352 LGSGPIWEE--MRALAHSKRKPLKNVRR--------VSVQPGQRSYLLTGPRGSGKSCILNQAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLKGLYDLP 444
            +G G + EE  + AL  +KR  ++   R         S++       +TG +G GKS  L   V  AR++G+IV+++PDG  + + G Y +PS   +G YDLP
Sbjct:  384 MGCGRMVEEWELAALKTTKRIMIRQCTRDMAQLLNKASMEHSCAKIFVTGRQGMGKSASLAAIVASARTSGYIVMYMPDGDRMRKLGKYIEPSSKRRGFYDLP 486          
BLAST of mRNA_H-canaliculatus_F_contig1394.3129.1 vs. uniprot
Match: A0A388LU35_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LU35_CHABU)

HSP 1 Score: 57.4 bits (137), Expect = 5.430e-5
Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 0
Query:  378 VSVQPGQRSYLLTGPRGSGKSCILNQAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLKGLYDLPV 445
            +  +P  R++LL GP GSGKS  L  AV  AR++GW+V +VP GR+ ++ G + + +     L+D PV
Sbjct:  201 IGRRPFGRNFLLDGPVGSGKSVALATAVHWARASGWLVFYVPSGRDWIKGGFFQKHAQT--NLWDTPV 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1394.3129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LJR3_ECTSI5.840e-9058.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXH7_9PHAE3.790e-4452.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TU02_9STRA2.090e-742.67Mitochondrial 28s ribosomal s29-like protein n=4 T... [more]
F0XXL1_AURAN8.010e-746.03Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A1Z5JXK7_FISSO1.650e-630.39Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S4RCC4_9STRA1.840e-539.74Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2XP72_9STRA5.150e-533.98Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A388LU35_CHABU5.430e-541.18Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019368Ribosomal protein S23/S29, mitochondrialPFAMPF10236DAP3coord: 385..448
e-value: 4.8E-10
score: 39.1
IPR019368Ribosomal protein S23/S29, mitochondrialPANTHERPTHR12810MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29coord: 372..447

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1394contigH-canaliculatus_F_contig1394:18221..21753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1394.3129.1mRNA_H-canaliculatus_F_contig1394.3129.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1394 18186..23408 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1394.3129.1 ID=prot_H-canaliculatus_F_contig1394.3129.1|Name=mRNA_H-canaliculatus_F_contig1394.3129.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=586bp
MATRIGLLRARGRSLGAQLLHGQQKLCISTGNTGNGSVRFLARLSSSHPA
ATAGSNSNAVEGSAPASSLVFSSSSSRQQQQRVLSSPFLGRANSRISSSS
RSGRSAQALFSSTSARPSDDGISAEVEGGDNDGSPSPAPMKFDGSSKKDR
LANLDDGDKYEDFVDLRLTEADKLYPEGPAGSGQGALERAMTRGSSTAVL
RREAAEALIHSIDGFAAAATGEAADAGAPFGIEGTASDKWRKARQAREQR
GSPSASAGRGDGGAGGDGSEVAGETGESASGNEVDEDDDIVGDVRAAAAE
GAAAAAAAAEAMSAAAVAAAGGGGPAEDEAADGEGSEEGGGEEGAQQKKT
VLGSGPIWEEMRALAHSKRKPLKNVRRVSVQPGQRSYLLTGPRGSGKSCI
LNQAVLHARSTGWIVLFVPDGRNLVQKGIYCQPSPVLKGLYDLPVQVEKE
PALCLPLLSILHVRAARLTSGEGRGMSEFLCSSCAVPDWPWNVTCCRFST
RTILRWWRHVVRSVAVFMPTTWALERSVWRCLEGCKRPCPQVTRQGPCGA
RLSIVGCSIRHLILFARVMSAFGTQGPNKASQASF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019368Ribosomal_S23/S29_mit