prot_H-canaliculatus_F_contig13924.3118.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13924.3118.1
Unique Nameprot_H-canaliculatus_F_contig13924.3118.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length336
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13924.3118.1 vs. uniprot
Match: A0A6H5K9W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W9_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.230e-5
Identity = 36/130 (27.69%), Postives = 61/130 (46.92%), Query Frame = 0 
Query:   62 DDEVIVTRTAMPAPEPFSPAPMRTDNVHLRNAMAAEHWKSWRSAPDVTVMLWVLTTVKPAAHTLKEGVLRSVLQDKAFVNANVTNQLNNMCDLRVRDFSPDCDDPGAGDIPLPDRLDIMIDAIMTVAARG 191
            + EV+++  A P     +       +  ++     E  ++WR+  + T   W LT  +P    +    +++ L D   V+  V   L +     +  F+   D PGAG IPL +RLD+ I AIM +A+RG
Sbjct:  123 EPEVVISNMAPPPRTRTAATSAAALSPQIQQLKIKEDLRAWRNPANAT--RWFLTGERPVGAAMSLNSMQASLHDVIGVSPAVFATLTDFAAFDIHKFAGPDDAPGAGGIPLAERLDLCIQAIMKLASRG 250
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13924.3118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9W9_9PHAE1.230e-527.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13924contigH-canaliculatus_F_contig13924:3..1010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13924.3118.1mRNA_H-canaliculatus_F_contig13924.3118.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13924 3..1012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13924.3118.1 ID=prot_H-canaliculatus_F_contig13924.3118.1|Name=mRNA_H-canaliculatus_F_contig13924.3118.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=336bp
NLKADQERLRADQERGAGILQQLELQANDFAATTTAVPADAHGGRQGSGE
TAASGVRLSHPDDEVIVTRTAMPAPEPFSPAPMRTDNVHLRNAMAAEHWK
SWRSAPDVTVMLWVLTTVKPAAHTLKEGVLRSVLQDKAFVNANVTNQLNN
MCDLRVRDFSPDCDDPGAGDIPLPDRLDIMIDAIMTVAARGVAVEEGTFR
LEILRTGLRRGHAMVRQHCYECRSLMMVPANYHMLAGIIDKDVGRWIAAW
LGEATAFKALYNEVPAFEHFPGVTTPTWSSLSNYINAGGLRNSPHQPHSA
GRGYSRATPGGSASPRAGRSNYCWDFASAGGCSRTA
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