prot_H-canaliculatus_F_contig13905.3105.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13905.3105.1
Unique Nameprot_H-canaliculatus_F_contig13905.3105.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length394
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13905.3105.1 vs. uniprot
Match: A0A6H5JE47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE47_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 9.120e-54
Identity = 95/132 (71.97%), Postives = 104/132 (78.79%), Query Frame = 0 
Query:    8 RRRGRAERDPAELEGRRHSCREFGCPRRAHFGTPGWVPAHCVEHRRDWEVLLKYASCLSEGCLETPGYGIVGDRSRVYCRRHRAPGSVSLACAGWKIPDDSRGAN------------GGGWVEAEEDGMGVP 127
            RRR RA+R  AE +G+RHSCRE  CPRRAHFG+PGWVPAHC EHRRDWEVLLKYASCLSEGCLETP YG+ GDRSR+YC+RHR PGSVSLA  GWK+PD   G +            GGGWVEAEEDGMGVP
Sbjct: 1179 RRRPRADRGLAEPDGKRHSCREIDCPRRAHFGSPGWVPAHCEEHRRDWEVLLKYASCLSEGCLETPHYGLPGDRSRLYCKRHRFPGSVSLASTGWKVPDVGDGGSCGXXXXXXXXXHGGGWVEAEEDGMGVP 1310
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BLAST of mRNA_H-canaliculatus_F_contig13905.3105.1 vs. uniprot
Match: D7FWE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE9_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 1.200e-53
Identity = 94/133 (70.68%), Postives = 104/133 (78.20%), Query Frame = 0 
Query:    8 RRRGRAERDPAELEGRRHSCREFGCPRRAHFGTPGWVPAHCVEHRRDWEVLLKYASCLSEGCLETPGYGIVGDRSRVYCRRHRAPGSVSLACAGWKIPDDS-------------RGANGGGWVEAEEDGMGVP 127
            RRR RA+R  AE +G+RHSCRE  CPRRAHFG+PGWVPAHC EHRRDWEVLLKYASCLSEGCLE P YG+ GDRSR+YC+RHR PGS+SL   GWK+PD               RGA+GGGWVEAEEDGMGVP
Sbjct: 1069 RRRPRADRGSAEPDGKRHSCREIDCPRRAHFGSPGWVPAHCEEHRRDWEVLLKYASCLSEGCLEIPRYGLPGDRSRLYCKRHRFPGSMSLESTGWKVPDAGDDGXXXXXXXXXXRGAHGGGWVEAEEDGMGVP 1201
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13905.3105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JE47_9PHAE9.120e-5471.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWE9_ECTSI1.200e-5370.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 320..356
NoneNo IPR availableCOILSCoilCoilcoord: 158..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13905contigH-canaliculatus_F_contig13905:20..2039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13905.3105.1mRNA_H-canaliculatus_F_contig13905.3105.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13905 20..2039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13905.3105.1 ID=prot_H-canaliculatus_F_contig13905.3105.1|Name=mRNA_H-canaliculatus_F_contig13905.3105.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=394bp
IAARISSRRRGRAERDPAELEGRRHSCREFGCPRRAHFGTPGWVPAHCVE
HRRDWEVLLKYASCLSEGCLETPGYGIVGDRSRVYCRRHRAPGSVSLACA
GWKIPDDSRGANGGGWVEAEEDGMGVPVDSDAEAEGELEDERAAAAAAAA
EGEERGPAEEDEEEEEEEEEERGVAEAAVSRGSGGSGGGEKLCGGIKSGK
RKAESGGRGAAGAQEQPEEEKAEAEDSGGAAKKRRAEAASSGGRPKGKGK
ATAATAATAHEEETEESSSSGSDSDSGSETDVKAAAAKEAAARAAAAKKA
AAAREAAAKAAAAAAAAAQAAAAAAAAKEEEEAKAKARAEAKAASAKAKA
DAKRDETLLADAEFALGRFVFLVPPKSKKCDRPILVGKIVDKMP
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