prot_H-canaliculatus_F_contig1389.3085.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1389.3085.1
Unique Nameprot_H-canaliculatus_F_contig1389.3085.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length395
Homology
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: D8LC14_ECTSI (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC14_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 1.770e-81
Identity = 160/224 (71.43%), Postives = 167/224 (74.55%), Query Frame = 0
Query:  121 KRKPRHTASTSRSPGDSATTSPGGAKRRLSPGTVPVGGRPT--GAAPWGAPAAGGLGGRGWGQASSYGAGGGRG------GRGPTSRRLHDGRSYTPRPQSLGEIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRSK 336
            KRKPRH                 GAKRRLS G  P GG     G  PWG  AA G+GGRG GQAS               GRG  +R LHD R YTPRP+S GE+PEDQLQVSFTRASGAGGQNVNKVSTKVE+RFVVSEAEWLP DVRLRLARQEKGR+NNKGELVVTAQEFRTQKQNR+QAL KLREMINEAWEPAKERKMRTGI KKGK IRKQDKLHRSK
Sbjct:   22 KRKPRHAXXX-------XXXXXRGAKRRLSSG--PEGGPAASPGTVPWGTGAAEGVGGRGRGQASXXXXXXXXXXXXXXXGRGTIARGLHDRRPYTPRPKSFGEVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNKGELVVTAQEFRTQKQNRSQALAKLREMINEAWEPAKERKMRTGISKKGKAIRKQDKLHRSK 236          
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A7S2PK85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK85_9STRA)

HSP 1 Score: 130 bits (327), Expect = 8.660e-32
Identity = 64/115 (55.65%), Postives = 88/115 (76.52%), Query Frame = 0
Query:  217 IPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDK 331
            IPEDQ+Q+SF RASGAGGQNVNKV+TKVE+RF +  A W+P +VR RL   E GR+NN+G   +T QE RTQ QNR +A++KL++++  +W+  K RK+R G+ KK KE R+++K
Sbjct:  126 IPEDQIQLSFARASGAGGQNVNKVNTKVELRFHIDSANWIPREVRDRLKTNEAGRINNEGYFAITCQENRTQVQNRKEAIKKLQDILKSSWDRPKVRKLRKGLTKKAKENRRENK 240          
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: B8C3Q8_THAPS (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q8_THAPS)

HSP 1 Score: 122 bits (305), Expect = 4.560e-30
Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 0
Query:  217 IPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDK 331
            IPEDQ+Q SF R+SGAGGQNVNKV TKVE+RF +  A W+P +VR RL   E  R+NN G + V +QE+RTQ QNR  AL+KL +++  +W   K RKMR G+  K KE R++ K
Sbjct:    3 IPEDQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYRTQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENRREMK 117          
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: K0R9L2_THAOC (RF_PROK_I domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9L2_THAOC)

HSP 1 Score: 123 bits (309), Expect = 3.460e-29
Identity = 70/150 (46.67%), Postives = 100/150 (66.67%), Query Frame = 0
Query:  196 PTSRRLHDGRSYTPRPQS--LGE--------IPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRS 335
            P S+R +  RS++ R ++   GE        IPE++LQ++F RASGAGGQNVNKV+TKVE+RF +  AEW+P +VR RL   E  R+NN+G + +T+QE RTQ QNR  A++KL++++  +W   K RK R G  +K KE R ++K   S
Sbjct:   96 PPSKRPNPRRSFSSRRRNGDSGEWKVPEHIAIPENELQITFARASGAGGQNVNKVNTKVEMRFHLPSAEWIPSEVRDRLQNNEANRINNEGYMSITSQEHRTQMQNRKDAMKKLQDIVRNSWARPKVRKTRKGPTRKAKEKRLENKKKNS 245          
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A1Z5KFY9_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFY9_FISSO)

HSP 1 Score: 119 bits (298), Expect = 6.620e-28
Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 0
Query:  216 EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRS 335
            +IPE+ L  SF R+SGAGGQNVNKV+++V++R  V+EA W+P +VR RL +Q+  R++ +G L + AQE RTQ  NR  A+QKLR+M+ +AW   KER++R GI  K KE RK+ K  RS
Sbjct:   98 DIPEENLDFSFVRSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHRTQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRS 217          
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A1Z5KKA6_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKA6_FISSO)

HSP 1 Score: 118 bits (296), Expect = 1.250e-27
Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 0
Query:  216 EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRS 335
            +IPE+ L  SF R+SGAGGQNVNKV+++V+VR  V EA W+P +VR RL +Q+  R++ +G L + AQE RTQ  NR  A+QKL+ M+ +AW   KER+MR GI  K KE RK+ K  RS
Sbjct:   97 DIPEENLDFSFVRSSGAGGQNVNKVNSQVQVRLNVHEAYWIPYEVRQRLLQQQANRISKEGVLTIAAQEHRTQVANRKAAVQKLQNMLLQAWPRPKERRMRQGISIKTKEQRKEFKRRRS 216          
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A7S2BJ82_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BJ82_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.080e-26
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 0
Query:  216 EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRSK 336
            ++PE++L  +FT + G GGQNVNKV+T+   RF V  A+WLP +VR RL  Q++GR+N K EL+V++QE RTQ++NR + L KL+ ++ EA    KER + T I KKGK  R+  K HRSK
Sbjct:   75 DVPENRLVFTFTPSQGPGGQNVNKVNTRAVARFHVPSADWLPVEVRGRLVEQQRGRMNQKDELIVSSQEHRTQRRNRVECLLKLKLLVAEAAVEPKERNLYTDISKKGKGQRRDAKRHRSK 195          
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A7S1D533_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D533_CYCTE)

HSP 1 Score: 115 bits (287), Expect = 6.020e-26
Identity = 61/132 (46.21%), Postives = 88/132 (66.67%), Query Frame = 0
Query:  216 EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRSKASFPCVSMEVS 347
            EIPED++ +SF+R+ G+GGQNVNKV+TKVE+RF + +A+WLP +VR R+  Q   R+N  G   + + E RTQ+QNR  A  KL+E++  A+   K RK+R GI KK KE   +DK  R +      S+++S
Sbjct:  133 EIPEDRVDISFSRSGGSGGQNVNKVNTKVELRFKLDDADWLPDEVRDRIREQAPNRINKDGVFNIQSSENRTQQQNRRAAFTKLQEIVLRAYPRPKVRKLRKGISKKAKERNLEDKKRRGQVKANRKSVDLS 264          
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A482RXH4_9ARCH (Aminoacyl-tRNA hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXH4_9ARCH)

HSP 1 Score: 112 bits (281), Expect = 6.480e-26
Identity = 63/135 (46.67%), Postives = 89/135 (65.93%), Query Frame = 0
Query:  196 PTSRRLHDGRSYTPRPQSLG-EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQ 329
            P  R L     Y P  Q+    +P D+++ SF R+SG GGQNVNK++TK E+RF V  A+W+ P+++ RL + +  RV+ +G+L++T QE RTQ +NR   LQ+LREM+ EA    KER+M  GIG KGK  RK+
Sbjct:   35 PYIRLLAINDDYVPSIQAKDIVVPLDKVEFSFARSSGPGGQNVNKLNTKAELRFNVLAADWMVPEIKQRLLQYQANRVSKEGDLIITCQEHRTQSKNREDCLQRLREMLAEASIEPKEREMWEGIGDKGKAKRKE 169          
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A8J9S3S9_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S3S9_PHATR)

HSP 1 Score: 110 bits (274), Expect = 1.390e-25
Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 0
Query:  217 IPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRS 335
            +PE QL+ SF R+ GAGGQNVNKV+T V+++  +    W+P +VR RL +Q++ RV+ +  LV+   E RTQ  NR  A+ KLR MI +AWE  KER +RTGI  K KE RK  K  RS
Sbjct:    3 VPESQLEFSFIRSGGAGGQNVNKVNTCVQIKLYLPGMTWVPTEVRQRLEQQQRHRVSKEQYLVMQVSEHRTQSANRKTAVDKLRNMIRQAWERPKERSIRTGISVKTKEQRKDFKRKRS 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC14_ECTSI1.770e-8171.43RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2PK85_9STRA8.660e-3255.65Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C3Q8_THAPS4.560e-3054.78RF_PROK_I domain-containing protein (Fragment) n=1... [more]
K0R9L2_THAOC3.460e-2946.67RF_PROK_I domain-containing protein n=2 Tax=Thalas... [more]
A0A1Z5KFY9_FISSO6.620e-2852.50Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A1Z5KKA6_FISSO1.250e-2753.33Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A7S2BJ82_9STRA1.080e-2650.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1D533_CYCTE6.020e-2646.21Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A482RXH4_9ARCH6.480e-2646.67Aminoacyl-tRNA hydrolase n=1 Tax=archaeon TaxID=19... [more]
A0A8J9S3S9_PHATR1.390e-2550.42Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 285..305
NoneNo IPR availableGENE3D3.30.160.20coord: 212..338
e-value: 1.8E-37
score: 130.1
NoneNo IPR availablePANTHERPTHR11075:SF54PEPTIDYL-TRNA HYDROLASE ICT1, MITOCHONDRIALcoord: 212..335
NoneNo IPR availablePANTHERPTHR11075PEPTIDE CHAIN RELEASE FACTORcoord: 212..335
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..394
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.458
NoneNo IPR availableSUPERFAMILY110916Peptidyl-tRNA hydrolase domain-likecoord: 206..310
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 216..335
e-value: 2.5E-22
score: 79.0
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 228..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1389contigH-canaliculatus_F_contig1389:8332..12408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1389.3085.1mRNA_H-canaliculatus_F_contig1389.3085.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1389 6896..12421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1389.3085.1 ID=prot_H-canaliculatus_F_contig1389.3085.1|Name=mRNA_H-canaliculatus_F_contig1389.3085.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=395bp
MREGGGRAVMALLLASRRGLSFTTSFSAASARARCAIPAVRHLSSQGLVP
SLSRSISRNCYSLPTPVAQAVRQRHGSVRALVAPLSMAAARSSPRDSANS
KINNNSGSNANATSSNSSSNKRKPRHTASTSRSPGDSATTSPGGAKRRLS
PGTVPVGGRPTGAAPWGAPAAGGLGGRGWGQASSYGAGGGRGGRGPTSRR
LHDGRSYTPRPQSLGEIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVV
SEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLR
EMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRSKASFPCVSMEVSPPC
LFERGVGAAFCAGASRCPSGPNGRRFCVASVLLFVAGADCCCFI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I