prot_H-canaliculatus_F_contig13878.3076.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig13878.3076.1
Unique Name	prot_H-canaliculatus_F_contig13878.3076.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	164

Homology

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BLAST of mRNA_H-canaliculatus_F_contig13878.3076.1 vs. uniprot
Match: D8LLZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ4_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 3.520e-21
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 0

Query:   32 RSPRWTVGAAVAGRLEEMRARELGASLRAKVQENEAMKRYVESVTEEMRALQLKVSRQ 89
            RSPRWTVGAAVAGRLE MRARELGASLRAKVQENEAMKRYVESVTEEMRALQ K+S+Q
Sbjct:  337 RSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKISQQ 394

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BLAST of mRNA_H-canaliculatus_F_contig13878.3076.1 vs. uniprot
Match: A0A6H5JD62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD62_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 8.000e-18
Identity = 55/68 (80.88%), Postives = 55/68 (80.88%), Query Frame = 0

Query:    9 SSGQLPEGDGRGAGXXXGMVGGGRSPRWTVGAAVAGRLEEMRARELGASLRAKVQENEAMKRYVESVT 76
            SS    EGDGRG        GGGRSPRWTVGAAVAGRLE MRARELGASLRAKVQENEAMKRYVESVT
Sbjct:  436 SSRGFSEGDGRG-------NGGGRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVT 496

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig13878.3076.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig13878.3076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LLZ4_ECTSI	3.520e-21	93.10	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JD62_9PHAE	8.000e-18	80.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig13878	contig	H-canaliculatus_F_contig13878:1115..1867 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig13878.3076.1	mRNA_H-canaliculatus_F_contig13878.3076.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig13878 1115..1867 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig13878.3076.1 ID=prot_H-canaliculatus_F_contig13878.3076.1|Name=mRNA_H-canaliculatus_F_contig13878.3076.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=164bp
MTAARGGSSSGQLPEGDGRGAGGGGGMVGGGRSPRWTVGAAVAGRLEEMR
ARELGASLRAKVQENEAMKRYVESVTEEMRALQLKVSRQPSPCPLSSPLP
PSPPPPLSPSSFASAAGRAHLPRSSVGGSASIAEIVARGVYGVDGIASRQ
HLTSSGGGGGGGGG