prot_H-canaliculatus_F_contig1387.3069.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1387.3069.1
Unique Nameprot_H-canaliculatus_F_contig1387.3069.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length406
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1387.3069.1 vs. uniprot
Match: D8LHA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA8_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 4.370e-74
Identity = 219/345 (63.48%), Postives = 230/345 (66.67%), Query Frame = 0 
Query:   63 APATGGSTGGGEGDSLEDIQTRLQQVDAISAKIDTAMMAAAEDRLPAVGGFALTRDVDCRRRRVPTARLQQHLTDVQRNSRQRGPKKVEPRGREDPLAPTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LEAKEAESRMWEECVDEGEAFVTAMLASVVRSLAEGPKTETELDQSVRSDMDTGRAAAGLPVADWSESHMVNVRLVVDVLIALGLVKSDYTTSEQSGGWPMDVHPPSESHGG 405
            A A G    G +G+SL DIQ+RLQQVD +SAKIDTAMMAA EDRLPAVGG ALTRDVDCRRRRVPTARLQQHLTDVQR+SRQRG +K + R  E         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                  ++AK   +R WEECVDEGEAFVTAMLASVVRSLAEGPKTETELDQSVRSDMD GRAAAGLPVA+WSESHMVNVRLVVDVLIALGLVKSDY T EQS GWPMDVHPPSESHGG
Sbjct:   64 AGADGSGAEGQQGESLRDIQSRLQQVDTLSAKIDTAMMAA-EDRLPAVGGMALTRDVDCRRRRVPTARLQQHLTDVQRHSRQRGVRKSDSRPPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKVPENGTVGAAAAGASAGNARGVNPPSGSGSGSSIGTGIASIKSTAAAQAGARRINGTQHHQVKKREDSKGTAMAGAAAGAVQAKAEVARTWEECVDEGEAFVTAMLASVVRSLAEGPKTETELDQSVRSDMDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGG 407
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1387.3069.1 vs. uniprot
Match: A0A6H5KYA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA3_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 4.650e-58
Identity = 230/497 (46.28%), Postives = 240/497 (48.29%), Query Frame = 0 
Query:   68 GSTGGGEGDSLEDIQTRLQQVDAISAKIDTAMMAAAEDRLPAVGGFALTRDVDCRRRRVPTARLQQHLTDVQRNSRQRGPKKVEPRGRED-------------------------------------------------------------------------------------------------------------------------------------------PLAPTTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------LEAKEAESRMWEECVDEGEAFVTAMLASVVRSLAEGPKTETELDQSVRSDMDTGRAAAGLPVADWSESHMVNVRLVVDVLIALGLVKSDYTTSEQSGGWPMDVHPPSESHGG 405
            GS   G+G+SL DIQ+RLQQVD +SAKIDTAMMAA EDRLPAVGG ALTRDVDCRRRRVPTARLQQHLTDVQR+SRQRG KK +PR  ED                                                                                                                                             AP   A                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                   ++AK A +R WEECVDEGEAFVTAMLASVVRSLAEGPKTETELDQSVRSDMD GRAAAGLPVA+WSESHMVNVRLVVDVLIALGLVKSDY T EQS GWPMDVHPPSESHGG
Sbjct:   68 GSGAEGQGESLRDIQSRLQQVDTLSAKIDTAMMAA-EDRLPAVGGMALTRDVDCRRRRVPTARLQQHLTDVQRHSRQRGVKKSDPRPPEDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINGTQHFQXXXXXXXXXXXXVLGGVPAAAPAAGAVAVTAVAVPSSVGAANAVAPLNASARHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCSKRDTPESLRAAAATAAETATAAMIHERVRVGGGDSREGAAAVEGXXXXXXXXXXXXXXXXXXXXVQAKTAVARTWEECVDEGEAFVTAMLASVVRSLAEGPKTETELDQSVRSDMDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGG 563
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1387.3069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHA8_ECTSI4.370e-7463.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYA3_9PHAE4.650e-5846.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 280..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1387contigH-canaliculatus_F_contig1387:707..4726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1387.3069.1mRNA_H-canaliculatus_F_contig1387.3069.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1387 707..4726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1387.3069.1 ID=prot_H-canaliculatus_F_contig1387.3069.1|Name=mRNA_H-canaliculatus_F_contig1387.3069.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=406bp
LRVQLRPKPAAASPPAPAAAAAADKSTATPVPAANGRMKSAPPATAGAAA
TGAESSASNGFAAPATGGSTGGGEGDSLEDIQTRLQQVDAISAKIDTAMM
AAAEDRLPAVGGFALTRDVDCRRRRVPTARLQQHLTDVQRNSRQRGPKKV
EPRGREDPLAPTTAAAAAVAAAAAAAPAPATIDPVPRQSQKGGAGSTGSS
SSGGCGSGKDSRKRKLPESGGGGGGGGGGAAATEGADAQPRPCPPAGSGT
ATGDRATTAVNAGAGAMDRREESKVAAAAAAALEAQAAAAAAALEAKEAE
SRMWEECVDEGEAFVTAMLASVVRSLAEGPKTETELDQSVRSDMDTGRAA
AGLPVADWSESHMVNVRLVVDVLIALGLVKSDYTTSEQSGGWPMDVHPPS
ESHGG*
back to top