prot_H-canaliculatus_F_contig13843.3049.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13843.3049.1
Unique Nameprot_H-canaliculatus_F_contig13843.3049.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length274
Homology
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: D7G0W4_ECTSI (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W4_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 4.100e-78
Identity = 134/147 (91.16%), Postives = 140/147 (95.24%), Query Frame = 0
Query:    1 MIDNVVEGGEEDDFRRSTVYLVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQ 147
            MIDNVVEGG + +FRRSTVYLVLAAV+CAIFSG RG IF+VVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTK+GDQVTLNVNVFLRN VMVVVTLLFMFYLSWRLSLVAFISVPAIV VSKWYG+YIR LSKLSQ
Sbjct:  113 MIDNVVEGGGDSEFRRSTVYLVLAAVSCAIFSGIRGCIFSVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKVGDQVTLNVNVFLRNLVMVVVTLLFMFYLSWRLSLVAFISVPAIVIVSKWYGEYIRKLSKLSQ 259          
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: A0A835YSY9_9STRA (ABC transporter type 1, transmembrane domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSY9_9STRA)

HSP 1 Score: 199 bits (507), Expect = 6.560e-56
Identity = 101/147 (68.71%), Postives = 125/147 (85.03%), Query Frame = 0
Query:    1 MIDNVVEGGEEDDFRRSTVYLVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQ 147
            M+  VV+ G E DFR + V LV AA+ CAIF+G RGG+FT+VG+RVNVR+R+ LF+SLVRQEIGFFDTTKTG++TSRL++DCTK+GDQV LN+N+FLRNFV    TLLFMFYLSWRLS VAF+SVPAIV VS++YG +IR+L+K  Q
Sbjct:  107 MVAAVVDRGREADFRPAAVRLVGAAIVCAIFTGVRGGLFTLVGSRVNVRIRQMLFDSLVRQEIGFFDTTKTGEITSRLSADCTKVGDQVCLNINLFLRNFVQAAGTLLFMFYLSWRLSTVAFVSVPAIVGVSRYYGHFIRDLAKQVQ 253          
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: W7TKE5_9STRA (Atp-binding cassette sub-family b member 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKE5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.270e-45
Identity = 91/146 (62.33%), Postives = 111/146 (76.03%), Query Frame = 0
Query:    2 IDNVVEGGEEDDFRRSTVYLVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQ 147
            ID +V       F+ + V LVL A  C   +G RG IFT+VGARVN R+R  LF+SL+RQE+GFFDT KTGDL+SRL+SDCTK+GDQV+LN+N FLR+ V  V TL+FMF  SW+LSLVAF+SVP IV +SK YGQYIR LSK +Q
Sbjct:  384 IDAIVSEEGAAAFQHAMVMLVLCAAVCGACTGLRGAIFTIVGARVNRRIRDMLFQSLIRQEVGFFDTAKTGDLSSRLSSDCTKVGDQVSLNINFFLRSLVQAVGTLIFMFIQSWKLSLVAFVSVPVIVIMSKIYGQYIRKLSKATQ 529          
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: A0A7R9YXX6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YXX6_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.170e-43
Identity = 77/120 (64.17%), Postives = 98/120 (81.67%), Query Frame = 0
Query:   21 LVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIR 140
            LV+A++   +F+G RG IFTVVG RVNVR+R  L +SL+ Q+IGFFD TKTGD+TSRL+SD T +GDQVT NVN+FLR+FV  V  L+FMF +SW+LSL+AFISVPAI  +SKWYG Y++
Sbjct:   12 LVVASILAGLFAGIRGSIFTVVGGRVNVRMRLVLMDSLLCQDIGFFDVTKTGDITSRLSSDTTLVGDQVTYNVNIFLRSFVQAVGVLIFMFMISWKLSLLAFISVPAITILSKWYGHYVK 131          
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: A0A7S2PB77_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB77_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.650e-42
Identity = 83/134 (61.94%), Postives = 107/134 (79.85%), Query Frame = 0
Query:   14 FRRSTVYLVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQ 147
            FR +   LV+AA+ CA+FSG RGGIFT++G RVN R+R +L +SL+ QEIGFFDTTKTGD+TSRL SD T +GDQVTLNVNVFLR+FV  +  L+FMF +SWRL+++  +SVPAI  +SK YG ++R L+KL Q
Sbjct:  429 FRSNIQKLVIAALLCALFSGLRGGIFTLIGGRVNSRLRLKLMDSLLAQEIGFFDTTKTGDITSRLCSDTTMVGDQVTLNVNVFLRSFVQAIGVLVFMFLVSWRLTMLVLLSVPAITIMSKLYGAFMRKLTKLMQ 562          
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: B7FY43_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY43_PHATC)

HSP 1 Score: 163 bits (412), Expect = 1.930e-42
Identity = 85/138 (61.59%), Postives = 107/138 (77.54%), Query Frame = 0
Query:   10 EEDDFRRSTVYLVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQ 147
            E  +F +    LVLA+V   +FSG RG +FTVVG RVNVR+R +L +SL+ Q+IGFFDTTKTGD+TSRL+SD T +GDQVTLNVNVFLR+ V     LL MF +SW+LS++AFISVP I  +SKWYG Y+R+L+KL Q
Sbjct:    3 EVPNFIKYVKLLVLASVLAGVFSGLRGSVFTVVGGRVNVRLRIQLMDSLLSQDIGFFDTTKTGDITSRLSSDTTLVGDQVTLNVNVFLRSLVQAFGVLLCMFLISWQLSILAFISVPLITILSKWYGNYVRSLTKLMQ 140          
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: A0A7S2KWJ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWJ3_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.150e-42
Identity = 83/134 (61.94%), Postives = 107/134 (79.85%), Query Frame = 0
Query:   14 FRRSTVYLVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQ 147
            FR +   LV+AA+ CA+FSG RGGIFT++G RVN R+R +L +SL+ QEIGFFDTTKTGD+TSRL SD T +GDQVTLNVNVFLR+FV  +  L+FMF +SWRL+++  +SVPAI  +SK YG ++R L+KL Q
Sbjct:  168 FRSNIQKLVIAALLCALFSGLRGGIFTLIGGRVNSRLRLKLMDSLLAQEIGFFDTTKTGDITSRLCSDTTMVGDQVTLNVNVFLRSFVQAIGVLVFMFLVSWRLTMLVLLSVPAITIMSKLYGAFMRKLTKLMQ 301          
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: A0A7S2PB08_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB08_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.290e-42
Identity = 83/134 (61.94%), Postives = 107/134 (79.85%), Query Frame = 0
Query:   14 FRRSTVYLVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQ 147
            FR +   LV+AA+ CA+FSG RGGIFT++G RVN R+R +L +SL+ QEIGFFDTTKTGD+TSRL SD T +GDQVTLNVNVFLR+FV  +  L+FMF +SWRL+++  +SVPAI  +SK YG ++R L+KL Q
Sbjct:  428 FRSNIQKLVIAALLCALFSGLRGGIFTLIGGRVNSRLRLKLMDSLLAQEIGFFDTTKTGDITSRLCSDTTMVGDQVTLNVNVFLRSFVQAIGVLVFMFLVSWRLTMLVLLSVPAITIMSKLYGAFMRKLTKLMQ 561          
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: A0A7S3LJM9_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LJM9_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.160e-40
Identity = 80/127 (62.99%), Postives = 104/127 (81.89%), Query Frame = 0
Query:   21 LVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQ 147
            LV+A+V   +FSG RG IFTVVG RVNVR+R +L ++L+ Q+IGFFD TKTGD+TSRL+SD T +GDQVTLNVNVFLR+ V  +  L FMF++SW+LS++AFISVP I  +SKWYG ++R+L+KL Q
Sbjct:  340 LVIASVLAGVFSGLRGSIFTVVGGRVNVRLRVQLMDALLAQDIGFFDVTKTGDITSRLSSDTTLVGDQVTLNVNVFLRSLVQAIGVLGFMFFVSWQLSILAFISVPLITILSKWYGMFVRSLTKLMQ 466          
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Match: A0A1E7FK35_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK35_9STRA)

HSP 1 Score: 155 bits (392), Expect = 4.080e-40
Identity = 78/127 (61.42%), Postives = 100/127 (78.74%), Query Frame = 0
Query:   21 LVLAAVACAIFSGTRGGIFTVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQ 147
            L++ ++   +FSG RG IF VVG RVNVR+R RL  SL+  E GFFD TKTGD+TSRL+SD T +GDQVTLNVNVFLR+ V V+  L+FMF +SW+LSL+AFISVP I  +SKWYG ++R+L+K+ Q
Sbjct:    7 LIVVSILSGVFSGVRGSIFMVVGGRVNVRLRLRLMSSLLTYEQGFFDLTKTGDITSRLSSDTTLVGDQVTLNVNVFLRSLVQVIGVLIFMFMVSWQLSLLAFISVPVITVLSKWYGNFVRSLTKVMQ 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13843.3049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0W4_ECTSI4.100e-7891.16ABC transmembrane type-1 domain-containing protein... [more]
A0A835YSY9_9STRA6.560e-5668.71ABC transporter type 1, transmembrane domain-conta... [more]
W7TKE5_9STRA1.270e-4562.33Atp-binding cassette sub-family b member 9 n=1 Tax... [more]
A0A7R9YXX6_9STRA1.170e-4364.17Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2PB77_9STRA1.650e-4261.94Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]
B7FY43_PHATC1.930e-4261.59Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S2KWJ3_9STRA2.150e-4261.94Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2PB08_9STRA4.290e-4261.94Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S3LJM9_9STRA1.160e-4062.99Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A1E7FK35_9STRA4.080e-4061.42p-loop containing nucleoside triphosphate hydrolas... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..152
e-value: 9.0E-43
score: 148.8
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 1..149
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 1..149
e-value: 2.5E-35
score: 122.5
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..149
score: 30.831
IPR039421Type I protein exporterPANTHERPTHR24221FAMILY NOT NAMEDcoord: 2..149
IPR030254ATP-binding cassette subfamily B member 9PANTHERPTHR24221:SF242ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 9coord: 2..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..273
NoneNo IPR availableTMHMMTMhelixcoord: 117..136
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13843contigH-canaliculatus_F_contig13843:390..2551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13843.3049.1mRNA_H-canaliculatus_F_contig13843.3049.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13843 390..2625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13843.3049.1 ID=prot_H-canaliculatus_F_contig13843.3049.1|Name=mRNA_H-canaliculatus_F_contig13843.3049.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=274bp
MIDNVVEGGEEDDFRRSTVYLVLAAVACAIFSGTRGGIFTVVGARVNVRV
RRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKIGDQVTLNVNVFLRNF
VMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKWYGQYIRNLSKLSQASS
PRRCWWARLAPGTPCRPLYLISALAVAYRRTFLELLCPPFSTTVPLLLPS
IAATAKADRSRATPLLGAARRIRRPLRKADSCPRPTRGKRGLLTLGRSRP
ALSLPSAFGRTSWRKRDPWRRRA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030254ABCB9
IPR039421Type_I_exporter
IPR011527ABC1_TM_dom
IPR036640ABC1_TM_sf