prot_H-canaliculatus_F_contig13758.2998.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13758.2998.1
Unique Nameprot_H-canaliculatus_F_contig13758.2998.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length91
Homology
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: D8LGU0_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU0_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 3.240e-50
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0
Query:    1 MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 91
            MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPL RAIAGVTV
Sbjct:   82 MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLVRAIAGVTV 172          
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A835ZC49_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC49_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.610e-35
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 0
Query:    1 MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 91
             ERFS+AGMTSGGYNKRDGRAS+KE LVSRL+DRPLRP +  GW HETQL++WV+SYD   PP PLAIT+ASA+L LS VP+ RA+AGVTV
Sbjct:   25 QERFSSAGMTSGGYNKRDGRASEKEVLVSRLIDRPLRPMIAQGWTHETQLITWVVSYDGSRPPEPLAITSASASLCLSQVPMRRAVAGVTV 115          
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: UPI001F5FE2A8 (probable polyribonucleotide nucleotidyltransferase 1, chloroplastic n=1 Tax=Vigna umbellata TaxID=87088 RepID=UPI001F5FE2A8)

HSP 1 Score: 116 bits (291), Expect = 3.580e-30
Identity = 58/91 (63.74%), Postives = 72/91 (79.12%), Query Frame = 0
Query:    1 MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 91
             ERFSAAG TSGG+ KR+G+  D E L+ RL+DRPLRP M  G++HETQ+LSWVLSYD +H P  LA+TAA  A+ALS VP+++AIAGV V
Sbjct:  142 QERFSAAGRTSGGFFKREGKTRDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGLHSPDSLAVTAAGIAVALSEVPMSKAIAGVRV 232          
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: D8UFR1_VOLCA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UFR1_VOLCA)

HSP 1 Score: 121 bits (304), Expect = 3.740e-30
Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = 0
Query:    2 ERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 91
            ERFSAAG TSGGY KRDGR  D E LVSRL+DRPLRP    GW +ETQ+L WVLSYD +H P P+AITAA+AAL +S++PL +A+AGV V
Sbjct:   34 ERFSAAGRTSGGYVKRDGRPRDSEVLVSRLVDRPLRPMFGKGWANETQVLEWVLSYDGIHNPEPIAITAAAAALLISDIPLKKAVAGVRV 123          
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A803LS92_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LS92_CHEQI)

HSP 1 Score: 117 bits (293), Expect = 4.380e-30
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0
Query:    1 MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 91
             ERFSAAG TSGG+ KR+GR  D E LV RL+DRPLRP M  G++HETQ+LSWVLSYD +HPP  LA+TAA  A+ALS +P T+ IAGV V
Sbjct:  143 QERFSAAGRTSGGFFKREGRPKDHEVLVCRLIDRPLRPTMVKGFYHETQVLSWVLSYDGLHPPDALAVTAAGIAVALSELPHTKTIAGVRV 233          
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A5J4Y9P8_9CHLO (Polynucleotide phosphorylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y9P8_9CHLO)

HSP 1 Score: 117 bits (292), Expect = 7.870e-30
Identity = 60/90 (66.67%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    2 ERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV 91
            ERFSAAG TSGG+ KRDGR+ + E LVSRL DRP+RP    GW  ETQ+L+WVLSYD    P PLAITAASAALA+S++PL +A+AGV V
Sbjct:   66 ERFSAAGKTSGGFIKRDGRSRESEVLVSRLTDRPIRPMFEKGWNRETQVLTWVLSYDGEQSPEPLAITAASAALAVSDIPLKKAVAGVRV 155          
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A1S4CDB9_TOBAC (polyribonucleotide nucleotidyltransferase 1, chloroplastic-like n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4CDB9_TOBAC)

HSP 1 Score: 116 bits (291), Expect = 8.020e-30
Identity = 58/89 (65.17%), Postives = 69/89 (77.53%), Query Frame = 0
Query:    1 MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGV 89
             ERFSAAG TSGG+ KR+GR  D E L+ RL+DRPLRP M  G++HETQ+LSWVLSYD +HPP  LA+TAA  A+ALS VP +  IAGV
Sbjct:  149 QERFSAAGRTSGGFFKREGRTKDHEVLICRLIDRPLRPTMLKGFYHETQVLSWVLSYDGLHPPDALAVTAAGIAMALSEVPSSEVIAGV 237          
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A2P2LQQ5_RHIMU (Polyribonucleotide nucleotidyltransferase n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LQQ5_RHIMU)

HSP 1 Score: 120 bits (300), Expect = 9.270e-30
Identity = 60/89 (67.42%), Postives = 71/89 (79.78%), Query Frame = 0
Query:    1 MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGV 89
             ERFSAAG TSGG+ KR+GRA D E L+ RL+DRPLRP M  G++HETQ+LSWVLSYD +HPP  LA+TAA  A+ALS VP T+ IAGV
Sbjct:  148 QERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGLHPPDALAVTAAGIAVALSEVPNTKVIAGV 236          
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A2P6TLY3_CHLSO (Polyribonucleotide nucleotidyltransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLY3_CHLSO)

HSP 1 Score: 120 bits (301), Expect = 9.590e-30
Identity = 59/87 (67.82%), Postives = 71/87 (81.61%), Query Frame = 0
Query:    2 ERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAG 88
            ERFSAAG TSGG+ KR+GR  D E LVSRL+DRP+RP +  GW H TQ+L+WVLSYD  H P PLAITAA AALA+S+VPL++A+AG
Sbjct:  160 ERFSAAGRTSGGFLKREGRPKDHEVLVSRLIDRPIRPMIQSGWTHSTQVLTWVLSYDGQHSPEPLAITAAGAALAISDVPLSKAVAG 246          
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Match: A0A2P2LQQ8_RHIMU (Polyribonucleotide nucleotidyltransferase n=5 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LQQ8_RHIMU)

HSP 1 Score: 120 bits (300), Expect = 1.310e-29
Identity = 60/89 (67.42%), Postives = 71/89 (79.78%), Query Frame = 0
Query:    1 MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGV 89
             ERFSAAG TSGG+ KR+GRA D E L+ RL+DRPLRP M  G++HETQ+LSWVLSYD +HPP  LA+TAA  A+ALS VP T+ IAGV
Sbjct:  148 QERFSAAGRTSGGFFKREGRAKDHEVLICRLIDRPLRPTMLKGFYHETQILSWVLSYDGLHPPDALAVTAAGIAVALSEVPNTKVIAGV 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13758.2998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGU0_ECTSI3.240e-5098.90Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]
A0A835ZC49_9STRA4.610e-3573.63Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
UPI001F5FE2A83.580e-3063.74probable polyribonucleotide nucleotidyltransferase... [more]
D8UFR1_VOLCA3.740e-3067.78Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A803LS92_CHEQI4.380e-3065.93Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]
A0A5J4Y9P8_9CHLO7.870e-3066.67Polynucleotide phosphorylase n=1 Tax=Trebouxia sp.... [more]
A0A1S4CDB9_TOBAC8.020e-3065.17polyribonucleotide nucleotidyltransferase 1, chlor... [more]
A0A2P2LQQ5_RHIMU9.270e-3067.42Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A2P6TLY3_CHLSO9.590e-3067.82Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A2P2LQQ8_RHIMU1.310e-2967.42Polyribonucleotide nucleotidyltransferase n=5 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..91
e-value: 1.0E-26
score: 95.7
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 10..81
e-value: 4.1E-8
score: 33.8
NoneNo IPR availablePANTHERPTHR11252:SF0POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIALcoord: 2..91
IPR012162Polyribonucleotide nucleotidyltransferasePANTHERPTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEcoord: 2..91
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 2..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13758contigH-canaliculatus_F_contig13758:1776..2891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13758.2998.1mRNA_H-canaliculatus_F_contig13758.2998.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13758 1776..2921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13758.2998.1 ID=prot_H-canaliculatus_F_contig13758.2998.1|Name=mRNA_H-canaliculatus_F_contig13758.2998.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=91bp
MERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQL
LSWVLSYDTVHPPVPLAITAASAALALSNVPLTRAIAGVTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR012162PNPase
IPR001247ExoRNase_PH_dom1
IPR027408PNPase/RNase_PH_dom_sf